Parental gene:

MTCH2, ENSSSCG00000013232

Aliases:None
Description:mitochondrial carrier 2 [Source:HGNC Symbol;Acc:17587]
Organism:Pig (Sus scrofa)
Coordinates:2:16159994..16180455(+)


>ENSSSCG00000013232
ATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAGGTGCT
CATCCAGGTGGGATATGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTATGTCAGCTTCCTGGCC
TCTTTTGTTATGCTCAGCACATCGCCAGCATCGATGGGAAGCGTGGATTGTTCACAGGCTTAACTCCAAGACTATGTTCA
GGGGTCCTTGGAACTGTTGTCCATGGTAAAGTTTTACAGCATTACCAGGAGTGTGACAAGGTTGAGGAGACGGGATCTGG
AAATGTACAGAAAGAAGTTTCCTCTTCCTTTGACCGAGTTATCAAGGAGACAACTCGAGAGATGATGGCTCGTTCTGCTG
CTACTCTCATCACACATCCCTTCCACGTGATCACTTTGAGATCTATGGTACAGTTCATTGGCAGAGAGTCCAAGTACTGT
GGACTTTGTGACTCCATAGTAACTATCTATCGGGAAGAGGGCATCCTAGGATTTTTTGCGGGTCTTATTCCTCGCCTCCT
AGGTGACATCATTTCTTTGTGGCTCTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCCA
CCATGAATGAAATGAAGAGTTATTCCCAAGCTGTCACAGGATTTTTTGCCAGTATGTTGACATATCCTTTTGTGCTTGTC
TCTAACCTTATGGCTGTCAACAACTGTGGGCTTGCTGGTGGATCCCCTCCTTATTCCCCAATATATACTTCTTGGATAGA
TTGCTGGTGCATGCTACAAAAAGAGGGAAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGGTCCCCTTTGGGAAGA
CTTATTGTTGTGACCTGAGAATGTTAATTTGA

Library Parental gene expression (RPM)
SRP014902_placenta 19 .11 RPM
SRP014902_testis 17 .12 RPM
SRP018288_heart 72 .66 RPM
SRP018288_kidney 124 .61 RPM
SRP018288_liver 80 .75 RPM
SRP018288_lung 28 .10 RPM
SRP018856_adipose 22 .65 RPM
SRP035408_brain 28 .14 RPM
SRP035408_liver 61 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018742 ortholog_one2one 1 retrogene
retro_btau_1321,
Choloepus hoffmanni ENSCHOG00000008473 ortholog_one2one 1 retrogene
retro_chof_2162,
Callithrix jacchus ENSCJAG00000020213 ortholog_one2one 3 retrogenes
retro_cjac_1551, retro_cjac_2003, retro_cjac_3812,
Dasypus novemcinctus ENSDNOG00000001221 ortholog_one2one 1 retrogene
retro_dnov_1867,
Homo sapiens ENSG00000109919 ortholog_one2one 2 retrogenes
retro_hsap_1041, retro_hsap_1690,
Gorilla gorilla ENSGGOG00000008281 ortholog_one2one 3 retrogenes
retro_ggor_1267, retro_ggor_3083, retro_ggor_822,
Mustela putorius furo ENSMPUG00000003852 ortholog_one2one 1 retrogene
retro_mputfur_312,
Mus musculus ENSMUSG00000027282 ortholog_one2one 1 retrogene
retro_mmus_2657,
Nomascus leucogenys ENSNLEG00000014704 ortholog_one2one 2 retrogenes
retro_nleu_1335, retro_nleu_913,
Oryctolagus cuniculus ENSOCUG00000006368 ortholog_one2one 2 retrogenes
retro_ocun_1197, retro_ocun_983,
Otolemur garnettii ENSOGAG00000011607 ortholog_one2one 1 retrogene
retro_ogar_2578,
Pongo abelii ENSPPYG00000003296 ortholog_one2one 3 retrogenes
retro_pabe_1392, retro_pabe_1894, retro_pabe_872,
Pan troglodytes ENSPTRG00000003573 ortholog_one2one 2 retrogenes
retro_ptro_1144, retro_ptro_710,
Pteropus vampyrus ENSPVAG00000007348 ortholog_one2one 1 retrogene
retro_pvam_954,
Sorex araneus ENSSARG00000001399 ortholog_one2one 1 retrogene
retro_sara_705,
Tursiops truncatus ENSTTRG00000014169 ortholog_one2one 2 retrogenes
retro_ttru_1476, retro_ttru_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_262 81.52 100.00
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2. retro_sscr_279 81.52 100.00
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3. retro_sscr_602 92.83 91.42
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Download FASTA sequences of all ENSSSCG00000013232 retrocopies