Parental gene:

MTCH2, ENSPTRG00000003573

Aliases:None
Description:Mitochondrial carrier homolog 2 [Source:UniProtKB/TrEMBL;Acc:K7CMR9]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:47763943..47794078(-)


>ENSPTRG00000003573
CCGCTCATGTACGTGAAAGTGCTCATCCAGGTGGGATATGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCG
GCAAGTGTGTCAGCTTCCTGGTCTCTTTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGCGGGTTGTTCACAG
GCTTAACTCCAAGACTGTGTTCGGGAGTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGAC
AAGGGTGAGGAGTTAGGACCTGGAAATGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCG
AGAGATGATCGCTCGTTCTGCTGCTACCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCA
TTGGCAGAGAATCCAAGTACTGTGGACTTTGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTC
GCGGGTCTTGTTCCTCGCCTTCTAGGTGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTA
TGCACTGGACAGTGGGGTTTCTACCATGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGT
TGACCTATCCCTTTGTGCTTGTCTCCAATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCC
CCAATATATACGTCTTGGATAGACTGTTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTATTTTT
CCGGAAGGTCCCCTTTGGGAAGACTTATTGTTGTGACCTGAAAATGTTAATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .97 RPM
SRP007412_cerebellum 42 .09 RPM
SRP007412_heart 42 .23 RPM
SRP007412_kidney 106 .88 RPM
SRP007412_liver 79 .81 RPM
SRP007412_testis 328 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018742 ortholog_one2one 1 retrogene
retro_btau_1321,
Choloepus hoffmanni ENSCHOG00000008473 ortholog_one2one 1 retrogene
retro_chof_2162,
Callithrix jacchus ENSCJAG00000020213 ortholog_one2one 3 retrogenes
retro_cjac_1551, retro_cjac_2003, retro_cjac_3812,
Dasypus novemcinctus ENSDNOG00000001221 ortholog_one2one 1 retrogene
retro_dnov_1867,
Homo sapiens ENSG00000109919 ortholog_one2one 2 retrogenes
retro_hsap_1041, retro_hsap_1690,
Gorilla gorilla ENSGGOG00000008281 ortholog_one2one 3 retrogenes
retro_ggor_1267, retro_ggor_3083, retro_ggor_822,
Mustela putorius furo ENSMPUG00000003852 ortholog_one2one 1 retrogene
retro_mputfur_312,
Mus musculus ENSMUSG00000027282 ortholog_one2one 1 retrogene
retro_mmus_2657,
Nomascus leucogenys ENSNLEG00000014704 ortholog_one2one 2 retrogenes
retro_nleu_1335, retro_nleu_913,
Oryctolagus cuniculus ENSOCUG00000006368 ortholog_one2one 2 retrogenes
retro_ocun_1197, retro_ocun_983,
Otolemur garnettii ENSOGAG00000011607 ortholog_one2one 1 retrogene
retro_ogar_2578,
Pongo abelii ENSPPYG00000003296 ortholog_one2one 3 retrogenes
retro_pabe_1392, retro_pabe_1894, retro_pabe_872,
Pan troglodytes ENSPTRG00000018115 within_species_paralog 1 retrogene
retro_ptro_2490,
Pteropus vampyrus ENSPVAG00000007348 ortholog_one2one 1 retrogene
retro_pvam_954,
Sorex araneus ENSSARG00000001399 ortholog_one2one 1 retrogene
retro_sara_705,
Sus scrofa ENSSSCG00000013232 ortholog_one2one 3 retrogenes
retro_sscr_262, retro_sscr_279, retro_sscr_602,
Tursiops truncatus ENSTTRG00000014169 ortholog_one2one 2 retrogenes
retro_ttru_1476, retro_ttru_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_710 75.13 69.37
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2. retro_ptro_1144 68.42 79.93
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Download FASTA sequences of all ENSPTRG00000003573 retrocopies