Parental gene:

MTCH2, ENSPPYG00000003296

Aliases:None
Description:Mitochondrial carrier homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R5M0]
Organism:Orangutan (Pongo abelii)
Coordinates:11:20964627..20993616(+)


>ENSPPYG00000003296
ATGCGCCTCTGTCTCTTAAGCCCCGCCCCGACCGCAGCGCCCCCTCGCGAGCGCCTGCCGTTTCTCGGGGCGGGACGGTG
GGGCGGGGACTGGGCGGAGAGGCGCGCGCTGGTGCGTGCGTGCGCGCGCGCCGCGGGCGGGCCAGTGAAACCGGCGGCCC
TGGCACGTGACCTAGGACCGGCTCACCGGGTCGCTTGGTGGCTCTGTCTGTCTGTCCGTCCGTCCGCGGGTGCCATCATG
GCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCACCATCCTGTCCCAGCCGCTCATGTACGTGAAAGTGCTCAT
CCAGGTGGGATATGAGCCTCTTCCTCCAACAATAGGACGAAATATTTTTGGGCGGCAAGTGTGTCAGCTTCCTGGTCTCT
TTAGTTATGCTCAGCACATTGCCAGTATCGATGGGAGGCGTGGGTTGTTCACAGGCTTAACTCCAAGACTGTGTTCGGGA
GTCCTTGGAACTGTGGTCCATGGTAAAGTTTTACAGCATTACCAGGAGAGTGACAAGGGTGAGGAGTTAGGACCTGGAAA
TGTACAGAAAGAAGTCTCATCTTCCTTTGACCACGTTATCAAGGAGACAACTCGAGAGATGATCGCTCGTTCTGCTGCTA
CCCTCATCACACATCCCTTCCATGTGATCACTCTGAGATCTATGGTACAGTTCATTGGCAGAGAATCCAAGTACTGTGGA
CTATGTGATTCCATAATAACCATCTATCGGGAAGAGGGCATTCTAGGATTTTTCGCGGGTCTTGTTCCTCGCCTTCTAGG
TGACATCCTTTCTTTGTGGCTGTGTAACTCACTGGCCTACCTCGTCAATACCTATGCACTGGACAGTGGGGTTTCTACCA
TGAATGAAATGAAGAGTTATTCTCAAGCTGTCACAGGATTTTTTGCGAGTATGTTGACCTATCCCTTTGTGCTTGTCTCC
AATCTTATGGCTGTCAACAACTGTGGTCTTGCTGGTGGATGCCCTCCTTACTCCCCAATATATACGTCTTGGATAGATTG
TTGGTGCATGCTACAAAAAGAGGGGAATATGAGCCGAGGAAATAGCTTGTTTTTCCGGAAGGTCCCCTTTGGGAAGACTT
ATTGTTGTGACCTGAAAATGTTAATTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .97 RPM
SRP007412_cerebellum 26 .02 RPM
SRP007412_heart 24 .99 RPM
SRP007412_kidney 66 .46 RPM
SRP007412_liver 73 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018742 ortholog_one2one 1 retrogene
retro_btau_1321,
Choloepus hoffmanni ENSCHOG00000008473 ortholog_one2one 1 retrogene
retro_chof_2162,
Callithrix jacchus ENSCJAG00000020213 ortholog_one2one 3 retrogenes
retro_cjac_1551, retro_cjac_2003, retro_cjac_3812,
Dasypus novemcinctus ENSDNOG00000001221 ortholog_one2one 1 retrogene
retro_dnov_1867,
Homo sapiens ENSG00000109919 ortholog_one2one 2 retrogenes
retro_hsap_1041, retro_hsap_1690,
Gorilla gorilla ENSGGOG00000008281 ortholog_one2one 3 retrogenes
retro_ggor_1267, retro_ggor_3083, retro_ggor_822,
Mustela putorius furo ENSMPUG00000003852 ortholog_one2one 1 retrogene
retro_mputfur_312,
Mus musculus ENSMUSG00000027282 ortholog_one2one 1 retrogene
retro_mmus_2657,
Nomascus leucogenys ENSNLEG00000014704 ortholog_one2one 2 retrogenes
retro_nleu_1335, retro_nleu_913,
Oryctolagus cuniculus ENSOCUG00000006368 ortholog_one2one 2 retrogenes
retro_ocun_1197, retro_ocun_983,
Otolemur garnettii ENSOGAG00000011607 ortholog_one2one 1 retrogene
retro_ogar_2578,
Pongo abelii ENSPPYG00000016557 within_species_paralog 2 retrogenes
retro_pabe_3011, retro_pabe_691,
Pan troglodytes ENSPTRG00000003573 ortholog_one2one 2 retrogenes
retro_ptro_1144, retro_ptro_710,
Pteropus vampyrus ENSPVAG00000007348 ortholog_one2one 1 retrogene
retro_pvam_954,
Sorex araneus ENSSARG00000001399 ortholog_one2one 1 retrogene
retro_sara_705,
Sus scrofa ENSSSCG00000013232 ortholog_one2one 3 retrogenes
retro_sscr_262, retro_sscr_279, retro_sscr_602,
Tursiops truncatus ENSTTRG00000014169 ortholog_one2one 2 retrogenes
retro_ttru_1476, retro_ttru_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_872 78.50 51.57
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2. retro_pabe_1392 67.98 59.42
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3. retro_pabe_1894 72.45 75.65
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Download FASTA sequences of all ENSPPYG00000003296 retrocopies