Parental gene: | SUMO1, ENSGGOG00000026439 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 2b:90704347..90736390(-) |
>ENSGGOG00000026439
ATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGCGTTCCAATGAATTCACTCAGGTTTCTCTTTGAGGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTG
GGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAACAGTTTAG
ATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGCGTTCCAATGAATTCACTCAGGTTTCTCTTTGAGGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTG
GGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAACAGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .21 RPM |
| SRP007412_cerebellum | 31 .05 RPM |
| SRP007412_heart | 10 .10 RPM |
| SRP007412_kidney | 52 .95 RPM |
| SRP007412_liver | 35 .53 RPM |
| SRP007412_testis | 41 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009859 | possible_ortholog | 6 retrogenes | |
| Canis familiaris | ENSCAFG00000012431 | possible_ortholog | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004961 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000012143 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000024693 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000031005 | possible_ortholog | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023769 | within_species_paralog | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007504 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000335 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000026021 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030345 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013083 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000012817 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016133 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011968 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000025405 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000642 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_299 | 99.01 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_311 | 82.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_725 | 63.11 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_1451 | 92.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_1550 | 87.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000026439 retrocopies