Parental gene:

HNRPDL, ENSLAFG00000008612

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_30:13957629..13961440(+)


>ENSLAFG00000008612
ATGGAGGTCCCGCCCCGGCTTTCCCATGTGCCGCCGCCATTGTTCCCCTCCGCTCCCGCTACTTTAGCCTCCCGCAGCCT
CTCCTATTGGCGACCGCGGGCGCCGCGGCAGCTCGCTCCGCTCCTCCCTTCGCTCGCTCCCAGCTCCTCCCGGCAGGGGG
CGCGCCGGGCCCAGCGCCACGTCACCGCCCAGCAGCCCTCCCGATTGGCGGGTGGGGCGGCTATAAAGGGAGGTCGCAGG
CGGCGCCCAGATCTCTTCCGCCGCCATTTTAAATCCAGTTCCATACAACGCTCCGCCGCCGCTACTGCCGCGACTCGATC
TGCGCGCCAGCACCCCGCTGCCGACAACTCCGCCACAATGGAGGACATGAACGAATACAGCAACATAGAGGAATTCGCAG
AGGGATCCAAGATCAATGCGAGCAAGAATCAGCAGGATGACGGTAAAATGTTTATTGGAGGCTTGAGCTGGGATACAAGC
AAGAAGGATCTGACTGAGTATTTGTCTCGATTTGGAGAGGTTGTAGACTGCACAATTAAAACAGATCCAGTCACTGGACG
GTCAAGAGGATTTGGATTTGTGCTTTTCAAAGACGCTGCTAGTGTTGATAAGGTTTTGGAACTGAAAGAACACAAACTGG
ATGGCAAATTGATAGACCCCAAAAGGGCCAAAGCTTTAAAAGGGAAGGAACCCCCAAAAAAGGTTTTTGTGGGTGGATTG
AGTCCAGATACTTCTGAAGAACAAATTAAGGAATATTTTGGCGCTTTCGGAGAGATTGAAAATATTGAACTTCCCATGGA
TACAAAAACAAATGAAAGAAGAGGATTTTGTTTTATCACATATACAGATGAAGAGCCTGTGAAGAAATTGTTAGAAAGCA
GATACCATCAAATTGGTTCTGGGAAGTGTGAAATCAAAGTTGCACAACCCAAAGAGGTATATAGGCAGCAACAGCAACAA
CAGAAAGGAGGAAGAGGTGCCACAGCTGGTGGACGAGGTGGTACTAGGGGTCGTGGACGAGGTCAGGGCCAAAACTGGAA
CCAAGGATTTAATAACTATTATGATCAAGGATATGGAAATTACAATAGTGCCTATGGTGGTGATCAAAACTATAGTGGCT
ATGGCGGATATGATTATACTGGGTATAACTATGGGAACTATGGATATGGACAGGGATATGCAGACTACAGTGGCCAACAG
AGCACGTATGGCAAGGCATCTCGAGGGGGTGGCAATCACCAAAACAATTACCAGCCATAC

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008940 ortholog_one2one 1 retrogene
retro_cfam_1086,
Choloepus hoffmanni ENSCHOG00000000160 ortholog_one2many 8 retrogenes
retro_chof_115, retro_chof_1470, retro_chof_2108, retro_chof_2370, retro_chof_533, retro_chof_59, retro_chof_741, retro_chof_890,
Choloepus hoffmanni ENSCHOG00000003275 ortholog_one2many 2 retrogenes
retro_chof_1578, retro_chof_18,
Dipodomys ordii ENSDORG00000000968 ortholog_one2one 1 retrogene
retro_dord_145,
Loxodonta africana ENSLAFG00000001189 within_species_paralog 1 retrogene
retro_lafr_405,
Loxodonta africana ENSLAFG00000016483 within_species_paralog 1 retrogene
retro_lafr_686,
Loxodonta africana ENSLAFG00000029587 other_paralog 5 retrogenes
retro_lafr_1202, retro_lafr_1208, retro_lafr_192, retro_lafr_747, retro_lafr_961,
Myotis lucifugus ENSMLUG00000014452 possible_ortholog 2 retrogenes
retro_mluc_1140, retro_mluc_1761,
Mustela putorius furo ENSMPUG00000014753 possible_ortholog 2 retrogenes
retro_mputfur_1359, retro_mputfur_600,
Nomascus leucogenys ENSNLEG00000008636 ortholog_one2one 1 retrogene
retro_nleu_673,
Otolemur garnettii ENSOGAG00000002501 possible_ortholog 4 retrogenes
retro_ogar_2717, retro_ogar_2791, retro_ogar_437, retro_ogar_693,
Rattus norvegicus ENSRNOG00000002270 possible_ortholog 1 retrogene
retro_rnor_1365,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_650 85.99 60.48
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Download FASTA sequences of all ENSLAFG00000008612 retrocopies