RetrogeneDB ID: | retro_chof_741 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_142466:3582..4256(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000000160 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.09 % |
Parental protein coverage: | 77.05 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | KKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKE |
K.....YLS.FGEVVDCTIKTD.VTGRSRGFGF.LF.DAASVDK..E.KEHKLDGKLIDPK.AKALKGKE | |
Retrocopy | KQERSDYLSQFGEVVDCTIKTDLVTGRSRGFGFMLF*DAASVDKA*EKKEHKLDGKLIDPKMAKALKGKE |
Parental | PPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT-KTNERRGFCFITYTDEEPVKKLLESRYHQIG |
PP.K.F.GG.SPDTSEEQIKEYF.AFG....IELP.D..KTNERRGFC.IT.TDEEPVKKLLESRYH.IG | |
Retrocopy | PPPKFFMGG*SPDTSEEQIKEYFRAFGKTKHIELPIDK<KTNERRGFCLITCTDEEPVKKLLESRYH*IG |
Parental | SGKCEIKVAQPKEVYRQQQQQQKGGRGAAAAGRGGTRDRGRGQGQNWNQGFNNYYDQGYGNYNSAYGGDQ |
.GKCEI.VAQPK.VYRQ.QQ.QKGGRGAAAAG.GGTR..G.G.GQNWNQGFNNYYDQGY.NYNSAY.G.. | |
Retrocopy | FGKCEIQVAQPKKVYRQKQQKQKGGRGAAAAG*GGTRGCGQGEGQNWNQGFNNYYDQGYVNYNSAYSGYW |
Parental | NYSGYGGYDYTGYNYG |
NYS.YG.YDYTGYN.G | |
Retrocopy | NYSDYGRYDYTGYNWG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |