Parental gene:

NKAP, ENSMMUG00000012382

Aliases:None
Description:NF-kappa-B-activating protein [Source:RefSeq peptide;Acc:NP_001248014]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:118218681..118237022(-)


>ENSMMUG00000012382
ATGGCTCCGGTGTCCGGCTCGCGCACCCCGGATAGGGAGGCCTCGGGCTCGGGGGGAAGACGTCGCAGTTCGTCCAAGAG
TCCGAAGCCCAGCAAATCTGCCCGCTCTCCGCGGGGCCGCCGCTCTCGCTCGCGCTCTTGCTCTCGGTCCGGGGACCGGA
ATGGACTCAGCCATCAGTTGGGTGGCCTCAGCCAAGGCTCCCGAAACCAGTCCTACCGCTCACGCTCCCGGTCGCGTTCT
CGAGAGCGGCCCTCTGCACCCCGGGGCATCCCCTTCGCTTCTGCCTCCTCGTCAGTCTATTATGGCAGCTACTCGCGCCC
CTACGGGAGCGACAAGCCTTGGCCTAGCCTCCTCGACAAGGAGAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGAGA
GAGAGAGAATTGGAGAACTGGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAGATTCTGATGAACAT
ACACCAGTGGAGGATGAAGAGCCAAAGAAAAGCACTACTTCAGCTTCCACTTCAGAAGAAAAAAAGAAGAAGAAGAAGTC
TAGCCATTCAAAAGAAAGGTCCAAGAAAAGGAGAAAGAAAAAATCATCGAAAAGAAAACATAAGAAGTATTCTGAAGATA
GCGACAGTGACTCTGATTCTGAAACAGACTCCAGTGATGAAGATAACAAAAGGAGAGCAAAGAAAGCCAAGAAAAAGGAA
AAGAAGAAGAAACACAGATCGAAGAAATATAAGAAAAAGAAGTCTAAGAAGAGCAGAAAAGAGTCCAGTGATTCAAGCTC
TAAAGAATCCCAAGAAGAGTTTCTGGAAAATCCCTGGAAGGATCGAACAAAGGCTGAAGAACCCTCAGATTTAATTGGCC
CAGAGGCTCCAAAAACACTTACCTCTCAAGATGATAAACCTTTGAACTATGGCCATGCTCTGTTACCTGGTGAAGGCGCA
GCTATGGCTGAATATGTAAAAGCTGGAAAACGTATCCCACGAAGAGGTGAAATTGGCTTGACAAGTGAAGAAATTGCATC
ATTTGAATGCTCAGGTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGCTGTGCGACTGCGAAAAGAGAACCAGA
TCTATAGTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGAAAGAGAGAGAACAAGATTCTGGCC
AGTTTTCGGGAAATGGTTTACAGAAAGACCAAAGGGAAGGATGACAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 6 .27 RPM
SRP007412_brain_prefrontal_cortex 6 .11 RPM
SRP007412_cerebellum 7 .04 RPM
SRP007412_heart 5 .36 RPM
SRP007412_kidney 6 .57 RPM
SRP007412_liver 2 .18 RPM
SRP007412_testis 10 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018433 ortholog_one2one 1 retrogene
retro_cfam_172,
Dasypus novemcinctus ENSDNOG00000000072 ortholog_one2one 1 retrogene
retro_dnov_50,
Echinops telfairi ENSETEG00000001007 ortholog_one2many 1 retrogene
retro_etel_1882,
Felis catus ENSFCAG00000004392 ortholog_one2one 1 retrogene
retro_fcat_10,
Homo sapiens ENSG00000101882 ortholog_one2one 1 retrogene
retro_hsap_15,
Loxodonta africana ENSLAFG00000002962 ortholog_one2one 1 retrogene
retro_lafr_37,
Mus musculus ENSMUSG00000016409 ortholog_one2one 1 retrogene
retro_mmus_279,
Nomascus leucogenys ENSNLEG00000014922 ortholog_one2one 1 retrogene
retro_nleu_88,
Otolemur garnettii ENSOGAG00000001004 ortholog_one2one 1 retrogene
retro_ogar_239,
Pongo abelii ENSPPYG00000020679 ortholog_one2one 1 retrogene
retro_pabe_198,
Pan troglodytes ENSPTRG00000022233 ortholog_one2one 1 retrogene
retro_ptro_117,
Rattus norvegicus ENSRNOG00000031169 ortholog_one2one 1 retrogene
retro_rnor_93,
Sus scrofa ENSSSCG00000012613 ortholog_one2one 1 retrogene
retro_sscr_13,
Ictidomys tridecemlineatus ENSSTOG00000001134 ortholog_one2one 1 retrogene
retro_itri_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_121 70.23 81.97
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Download FASTA sequences of all ENSMMUG00000012382 retrocopies