Parental gene:

NKAP, ENSPTRG00000022233

Aliases:None
Description:NFKB activating protein [Source:UniProtKB/TrEMBL;Acc:K7CNN0]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:120440096..120453247(-)


>ENSPTRG00000022233
AGATTAAGTGAGAGAGAGAGAATTGGAGAATTGGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAGA
TTCTGATGAACATACACCAGTGGAGGATGAAGAGCCAAAGAAAAGCACTACTTCAGCTTCTACTTCAGAAGAAGAAAAAA
AGAAGAAGTCTAGCCATTCAAAAGAAAGGTCCAAGAAAAGGAGAAAGAAAAAATCATCGAAAAGAAAACATAAGAAGTAT
TCTGAAGATAGCGACAGTGACTCTGATTCTGAAACAGACTCCAGTGATGAAGATAACAAAAGGAGAGCAAAGAAAGCCAA
GAAAAAGGAAAAGAAGAAGAAACACAGATCGAAGAAATATAAGAAAAAGAGGTCTAAGAAGAGCAGAAAAGAGTCCAGTG
ATTCAAGCTCTAAAGAATCCCAAGAAGAGTTTCTGGAAAATCCCTGGAAGGATCGAACAAAGGCTGAAGAACCATCAGAT
TTAATTGGCCCAGAGGCTCCAAAAACACTTACCTCTCAAGATGATAAACCTTTGAACTATGGCCATGCTCTGTTACCTGG
TGAAGGTGCAGCTATGGCTGAATATGTAAAAGCTGGAAAACGTATCCCACGAAGAGGTGAAATTGGCTTGACAAGTGAAG
AAATTGCATCATTTGAATGCTCAGGTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGCTGTGCGACTGCGAAAA
GAGAACCAGATCTACAGTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGAAAGAGAGAGAACAA
GATTCTGGCCAGTTTTCGAGAAATGGTTTACAGAAAGACCAAAGGGAAGGATGAC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .84 RPM
SRP007412_cerebellum 4 .91 RPM
SRP007412_heart 4 .26 RPM
SRP007412_kidney 4 .86 RPM
SRP007412_liver 4 .26 RPM
SRP007412_testis 3 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018433 ortholog_one2one 1 retrogene
retro_cfam_172,
Dasypus novemcinctus ENSDNOG00000000072 ortholog_one2one 1 retrogene
retro_dnov_50,
Echinops telfairi ENSETEG00000001007 ortholog_one2many 1 retrogene
retro_etel_1882,
Felis catus ENSFCAG00000004392 ortholog_one2one 1 retrogene
retro_fcat_10,
Homo sapiens ENSG00000101882 ortholog_one2one 1 retrogene
retro_hsap_15,
Loxodonta africana ENSLAFG00000002962 ortholog_one2one 1 retrogene
retro_lafr_37,
Macaca mulatta ENSMMUG00000012382 ortholog_one2one 1 retrogene
retro_mmul_121,
Mus musculus ENSMUSG00000016409 ortholog_one2one 1 retrogene
retro_mmus_279,
Nomascus leucogenys ENSNLEG00000014922 ortholog_one2one 1 retrogene
retro_nleu_88,
Otolemur garnettii ENSOGAG00000001004 ortholog_one2one 1 retrogene
retro_ogar_239,
Pongo abelii ENSPPYG00000020679 ortholog_one2one 1 retrogene
retro_pabe_198,
Rattus norvegicus ENSRNOG00000031169 ortholog_one2one 1 retrogene
retro_rnor_93,
Sus scrofa ENSSSCG00000012613 ortholog_one2one 1 retrogene
retro_sscr_13,
Ictidomys tridecemlineatus ENSSTOG00000001134 ortholog_one2one 1 retrogene
retro_itri_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_117 73.96 100.00
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Download FASTA sequences of all ENSPTRG00000022233 retrocopies