Parental gene:

MMU.10197, ENSMMUG00000021773

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:56967830..56979281(-)


>ENSMMUG00000021773
ATGTCTTTCCTCCAGGACCCAAGTTTCTTCACCATGGGGATGTGGTCCATTGGTGCAGGAGCCCTGGGGGCTGCTGCCTT
GGCATTGCTGCTTGCCAACACAGACGTGTTTCTGTCCAAGCCCCAGAAAGCAGCCCTGGAGTACCTGGAGGATATAGACC
TGAAAACACTGGAGAAGGAACCAAGGACTTTGAAAGCAAAGGAGCTATGGGAAAAAAATGGAGCTGTGATTATGGCCGTG
CGGAGGCCAGGCTGTTTCCTCTGTCGAGAGGAAGCTGCAGATCTGTCTTCCCTGAAAAGCATGTTGGACCAGCTGGGCGT
CCCCCTCTATGCAGTGGTAAAGGAGCACATCAGGACCGAAGTGGAGGATTTCCAGCCTTATTTCAAAGGAGAAATCTTCC
TGGATGAAAAGAAAAAGTTTTATGGTCCACAAAGGCGGAAGATGATGTTTATGGGATTTATCCGTCTGGGAGTGTGGTAC
AACTTCTTCCGAGCCTGGAATGGAGGCTTCTCTGGAAACCTGGAAGGAGAAGGCTTCATCCTTGGGGGAGTTTTCGTGGT
GGGATCAGGAAAGCAGGGCATTCTTCTTGAGCACCGAGAGAAAGAGTTTGGAGACAAAGTAAACTTACTTTCTGTTCTGG
AAGCTGCTAAGATGATCAAACCACAG

Library Parental gene expression (RPM)
SRP007412_brain 52 .55 RPM
SRP007412_brain_prefrontal_cortex 48 .87 RPM
SRP007412_cerebellum 10 .40 RPM
SRP007412_heart 29 .03 RPM
SRP007412_kidney 41 .90 RPM
SRP007412_liver 19 .16 RPM
SRP007412_testis 24 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000813 ortholog_one2one 1 retrogene
retro_chof_878,
Callithrix jacchus ENSCJAG00000003657 ortholog_one2one 1 retrogene
retro_cjac_3312,
Dasypus novemcinctus ENSDNOG00000001981 ortholog_one2one 3 retrogenes
retro_dnov_1843, retro_dnov_1901, retro_dnov_868,
Homo sapiens ENSG00000122378 ortholog_one2one 2 retrogenes
retro_hsap_1135, retro_hsap_4076,
Gorilla gorilla ENSGGOG00000013246 ortholog_one2one 2 retrogenes
retro_ggor_2733, retro_ggor_886,
Microcebus murinus ENSMICG00000007485 ortholog_one2one 2 retrogenes
retro_mmur_1346, retro_mmur_1481,
Mus musculus ENSMUSG00000021792 ortholog_one2one 1 retrogene
retro_mmus_2227,
Otolemur garnettii ENSOGAG00000013638 ortholog_one2one 7 retrogenes
retro_ogar_2126, retro_ogar_2435, retro_ogar_2562, retro_ogar_3327, retro_ogar_420, retro_ogar_580, retro_ogar_784,
Procavia capensis ENSPCAG00000009696 ortholog_one2one 1 retrogene
retro_pcap_281,
Pongo abelii ENSPPYG00000025862 ortholog_one2one 4 retrogenes
retro_pabe_3345, retro_pabe_643, retro_pabe_738, retro_pabe_944,
Pan troglodytes ENSPTRG00000002685 ortholog_one2one 2 retrogenes
retro_ptro_2763, retro_ptro_774,
Rattus norvegicus ENSRNOG00000011140 ortholog_one2one 1 retrogene
retro_rnor_1517,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_881 62.75 68.02
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_2351 84.11 67.57
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_2409 86.10 98.65
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000021773 retrocopies