Parental gene:

RPL27A, ENSMODG00000007480

Aliases:None
Description:ribosomal protein L27a [Source:HGNC Symbol;Acc:10329]
Organism:Opossum (Monodelphis domestica)
Coordinates:5:248268628..248271975(+)


>ENSMODG00000007480
ATGCCTTCCCGACTGAGGAAGACGCGGAAGCTCCGCGGGCACGTCAGTCATGGCCACGGACGCATCGGCAAGCACCGCAA
GCACCCCGGAGGTCGCGGTAATGCAGGAGGGCTGCACCATCACCGAATTAACTTCGACAAATATCACCCAGGTTACTTTG
GGAAAGTGGGAATGAGGCATTACCACTTGAAGAAGAACCAAAGCTACTGCCCAACTGTCAACCTTGATAAGCTGTGGACA
CTGGTCAGTGAGCAGACCAGGATTAATGCTGCCAAAAGCAAGGAGGGGCTTGCCCCAATCATTGATGTTGTGCGCTCTGG
TTACTACAAAGTCCTAGGAAAGGGGAAACTCCCCAAGCAGCCAGTCATCGTGAAGGCAAAATTCTTCAGCAGAAGAGCAG
AGGAAAAAATCAAGGGTGTTGGTGGAGCCTGTGTCCTTGTGGCATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004205 possible_ortholog 15 retrogenes
retro_amel_1095, retro_amel_1160, retro_amel_1165, retro_amel_130, retro_amel_1311, retro_amel_1441, retro_amel_1673, retro_amel_393, retro_amel_450, retro_amel_497, retro_amel_521, retro_amel_693, retro_amel_752, retro_amel_966, retro_amel_989,
Bos taurus ENSBTAG00000005349 possible_ortholog 2 retrogenes
retro_btau_126, retro_btau_45,
Canis familiaris ENSCAFG00000006936 possible_ortholog 2 retrogenes
retro_cfam_145, retro_cfam_384,
Callithrix jacchus ENSCJAG00000011775 possible_ortholog 1 retrogene
retro_cjac_211,
Felis catus ENSFCAG00000008411 possible_ortholog 13 retrogenes
retro_fcat_1162, retro_fcat_1285, retro_fcat_1305, retro_fcat_1380, retro_fcat_1635, retro_fcat_1761, retro_fcat_1805, retro_fcat_1974, retro_fcat_469, retro_fcat_652, retro_fcat_673, retro_fcat_817, retro_fcat_907,
Gorilla gorilla ENSGGOG00000001660 possible_ortholog 2 retrogenes
retro_ggor_155, retro_ggor_1785,
Loxodonta africana ENSLAFG00000000425 possible_ortholog 2 retrogenes
retro_lafr_25, retro_lafr_50,
Myotis lucifugus ENSMLUG00000016616 possible_ortholog 7 retrogenes
retro_mluc_113, retro_mluc_1253, retro_mluc_164, retro_mluc_2123, retro_mluc_2202, retro_mluc_47, retro_mluc_572,
Macaca mulatta ENSMMUG00000021828 possible_ortholog 2 retrogenes
retro_mmul_207, retro_mmul_268,
Mustela putorius furo ENSMPUG00000012532 possible_ortholog 3 retrogenes
retro_mputfur_118, retro_mputfur_1362, retro_mputfur_464,
Mus musculus ENSMUSG00000046364 possible_ortholog 1 retrogene
retro_mmus_40,
Nomascus leucogenys ENSNLEG00000017535 possible_ortholog 1 retrogene
retro_nleu_102,
Oryctolagus cuniculus ENSOCUG00000005442 possible_ortholog 1 retrogene
retro_ocun_12,
Pan troglodytes ENSPTRG00000003333 possible_ortholog 1 retrogene
retro_ptro_33,
Rattus norvegicus ENSRNOG00000014214 possible_ortholog 10 retrogenes
retro_rnor_132, retro_rnor_193, retro_rnor_1996, retro_rnor_2466, retro_rnor_253, retro_rnor_261, retro_rnor_334, retro_rnor_370, retro_rnor_565, retro_rnor_606,
Sus scrofa ENSSSCG00000014569 possible_ortholog 9 retrogenes
retro_sscr_527, retro_sscr_574, retro_sscr_587, retro_sscr_588, retro_sscr_644, retro_sscr_668, retro_sscr_677, retro_sscr_769, retro_sscr_809,
Tarsius syrichta ENSTSYG00000013207 possible_ortholog 16 retrogenes
retro_tsyr_1103, retro_tsyr_155, retro_tsyr_1591, retro_tsyr_1607, retro_tsyr_1623, retro_tsyr_170, retro_tsyr_1725, retro_tsyr_187, retro_tsyr_204, retro_tsyr_283, retro_tsyr_498, retro_tsyr_50, retro_tsyr_550, retro_tsyr_608, retro_tsyr_612, retro_tsyr_716,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_575 73.33 91.22
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMODG00000007480 retrocopies