Parental gene:

E2F6, ENSMMUG00000023225

Aliases:None
Description:transcription factor E2F6 [Source:RefSeq peptide;Acc:NP_001253584]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:11518916..11538626(-)


>ENSMMUG00000023225
ATGAGTCAGCAGCGGCCGGCGAGGAAGTTGCCCAGTCTCCTCCTGGACCCCGCGGAGGAGACGGTTCGCCGTCGGTGCCG
AGACCCCATCAACGTGGAGGGACTGCTGCCATCAAAAATAAGGATTAATTTAGAAGATAATGTACAATATGTGTCCATGA
GAAAAGCTCTAAAAGTGAAGAGACCTCGTTTTGATGTATCACTGGTTTATTTAACTCGAAAATTTATGGATCTTGTCAGA
TCTGCTCCTGGGGGTATTCTTGACTTAAACAAGGTTGCAACGAAACTGGGAGTCCGCAAGCGGAGAGTGTATGACATCAC
CAATGTCTTAGATGGAATCGACCTCGTTGAAAAGAAATCCAAGAACCATATTCGATGGATAGGATCTGATCTTAGCAATT
TTGGAGCAGTTCCCCAACAAAAGAAGCTGCAAGAGGAACTTTCTGACTTATCAGCAATGGAAGATGCTTTGGATGAGTTA
ATTAAGGATTGTGCTCAGCAGCTGTTTGAGTTAACAGATGACAAAGAAAATGAAAGATATCCTTTAACATATGTGACCTA
TCAAGACATTCATAGCATTCAGGCCTTCCATGAACAGATCGTCATTGCAGTTAAAGCTCCAGCAGAAACCAGATTGGATG
TTCCAGCTCCCAGAGAAGACTCTATCACAGTGCACATAAGGAGCACCAACGGACCTATCGATGTCTATTTGTGTGAAGTG
GAGCAGGGTCAGACTGGTAGCAAAAGGTCTGAAGGAGTCGGAACCTCTTCATCTGAGAGCACTCATGCAGAAGGCCCTGA
GGAAGAAGAAAATCCTCAGCAAAGTGAAGAATTGCTTGAAGTAAGCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain 13 .67 RPM
SRP007412_brain_prefrontal_cortex 8 .88 RPM
SRP007412_cerebellum 12 .98 RPM
SRP007412_heart 8 .66 RPM
SRP007412_kidney 9 .98 RPM
SRP007412_liver 3 .80 RPM
SRP007412_testis 5 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000048286 ortholog_one2one 1 retrogene
retro_btau_1820,
Callithrix jacchus ENSCJAG00000006910 ortholog_one2one 1 retrogene
retro_cjac_178,
Dasypus novemcinctus ENSDNOG00000000258 ortholog_one2one 1 retrogene
retro_dnov_187,
Homo sapiens ENSG00000169016 ortholog_one2one 4 retrogenes
retro_hsap_2542, retro_hsap_2547, retro_hsap_2572, retro_hsap_4906,
Macropus eugenii ENSMEUG00000007957 ortholog_one2many 4 retrogenes
retro_meug_1169, retro_meug_860, retro_meug_882, retro_meug_893,
Myotis lucifugus ENSMLUG00000003384 ortholog_one2many 1 retrogene
retro_mluc_864,
Macaca mulatta ENSMMUG00000017649 within_species_paralog 1 retrogene
retro_mmul_955,
Nomascus leucogenys ENSNLEG00000014134 ortholog_one2one 1 retrogene
retro_nleu_2351,
Pongo abelii ENSPPYG00000012646 ortholog_one2one 1 retrogene
retro_pabe_1,
Pan troglodytes ENSPTRG00000011661 ortholog_one2one 2 retrogenes
retro_ptro_1484, retro_ptro_3272,
Ictidomys tridecemlineatus ENSSTOG00000003316 ortholog_one2one 1 retrogene
retro_itri_135,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_87 52.53 90.81
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Download FASTA sequences of all ENSMMUG00000023225 retrocopies