Parental gene:

HNRNPDL, ENSTTRG00000001793

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein D-like [Source:HGNC Symbol;Acc:5037]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_112410:29833..33519(-)


>ENSTTRG00000001793
ATGGAGGTCCCGCCCCGGCTTTCCCATGTGCCGCCGCCATTGTTCCCCTCCGCTCCCGCTACTTTAGCCTCCCGCAGCCT
CTCCCATTGGCGGCCGAGGGCGCCGCGGCAGCTCGCCCCACTCCTCCCTTCGCTCGCTCCCAGCTCCGCCCGGCAGGGGG
CGCGCCGGGCCCAGCGCCACGTCACCGCCCAGCAGCCCTCCCGATTGGCGGGTGGGGCGGCTATAAAGGGAGGGCGCAGG
CGGCGCCCGGATCTCTTCCGCCGCCATTTTAAATCCAGCTCCATACAACGTTCTGCCGCCGCTGCTGCCGCGACACGGAT
TGCACGCCAGCGCTTCCCGGCCGATAACTCAGCCGCTATGGAAGACATGAACGAGTACAGCAACATAGAGGAATTTGCAG
AGGGATCTAAGATCAACGCGAGCAAGAATCAGCAGGATGACGGTAAAATGTTTATTGGAGGCTTGAGCTGGGATACAAGC
AAGAAAGATCTGACTGAATATTTGTCTCGATTTGGGGAAGTTGTAGACTGCACAATTAAAACAGATCCAGTCACTGGAAG
ATCAAGAGGATTTGGATTTGTGCTTTTCAAAGATGCTGCTAGTGTTGATAAGGTTTTGGAAATGAAAGAACACAAGCTGG
ATGGCAAATTGATAGACCCTAAAAGAGCCAAAGCTTTAAAAGGGAAGGAACCCCCTAAAAAGGTTTTTGTGGGTGGATTG
AGCCCAGATACTTCAGAAGAACAAATTAAAGAATATTTTGGAGCCTTTGGAGAGATTGAAAATATTGAACTTCCCATGGA
TACAAAAACAAATGAAAGAAGAGGATTTTGTTTTATTACATATACAGACGAAGAGCCAGTAAAGAAATTGTTAGAAAGCA
GATATCATCAAATTGGTTCTGGGAAGTGTGAAATCAAAGTTGCACAACCCAAAGAGGTATATAGGCAGCAACAGCAACAA
CAAAAAGGAGGAAGAGGTGCTGCAGCTGGTGGACGAGGTGGTACTAGGGGTCGTGGCCGAGGTCAGGGCCAAAACTGGAA
CCAAGGATTTAATAACTATTATGATCAAGGATATGGAAATTACAATAGTGCCTATGGTGGTGATCAAAACTATAGTGGCT
ATGGCGGCTATGATTATACTGGGTATAACTATGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAACAG
AGCACTTATGGCAAGGCATCTCGAGGGGGTGGCAATCACCAAAATAATTACCAGCCATACTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015197 ortholog_one2one 1 retrogene
retro_cjac_2589,
Dasypus novemcinctus ENSDNOG00000003887 possible_ortholog 7 retrogenes
retro_dnov_1175, retro_dnov_1182, retro_dnov_144, retro_dnov_1603, retro_dnov_31, retro_dnov_723, retro_dnov_930,
Felis catus ENSFCAG00000000455 ortholog_one2one 1 retrogene
retro_fcat_1568,
Macropus eugenii ENSMEUG00000011454 ortholog_one2one 7 retrogenes
retro_meug_1252, retro_meug_1378, retro_meug_1491, retro_meug_1971, retro_meug_2165, retro_meug_249, retro_meug_766,
Monodelphis domestica ENSMODG00000011916 possible_ortholog 6 retrogenes
retro_mdom_1496, retro_mdom_1789, retro_mdom_1951, retro_mdom_2017, retro_mdom_546, retro_mdom_981,
Otolemur garnettii ENSOGAG00000002501 possible_ortholog 4 retrogenes
retro_ogar_2717, retro_ogar_2791, retro_ogar_437, retro_ogar_693,
Ictidomys tridecemlineatus ENSSTOG00000013979 ortholog_one2one 1 retrogene
retro_itri_1177,
Tursiops truncatus ENSTTRG00000000709 within_species_paralog 3 retrogenes
retro_ttru_1066, retro_ttru_1204, retro_ttru_1788,
Tursiops truncatus ENSTTRG00000004505 other_paralog 27 retrogenes
retro_ttru_1202, retro_ttru_1223, retro_ttru_1251, retro_ttru_1331, retro_ttru_1362, retro_ttru_156, retro_ttru_157, retro_ttru_1678, retro_ttru_1732, retro_ttru_1806, retro_ttru_1813, retro_ttru_1874, retro_ttru_221, retro_ttru_311, retro_ttru_479, retro_ttru_599, retro_ttru_605, retro_ttru_607, retro_ttru_620, retro_ttru_63, retro_ttru_678, retro_ttru_708, retro_ttru_812, retro_ttru_882, retro_ttru_902, retro_ttru_926, retro_ttru_981,
Tursiops truncatus ENSTTRG00000007592 within_species_paralog 1 retrogene
retro_ttru_1913,
Tursiops truncatus ENSTTRG00000014225 other_paralog 3 retrogenes
retro_ttru_1459, retro_ttru_675, retro_ttru_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_744 95.45 62.86
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2. retro_ttru_1486 57.21 51.19
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Download FASTA sequences of all ENSTTRG00000001793 retrocopies