Parental gene:

ST13, ENSMPUG00000016432

Aliases:None
Description:suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) [Source:HGNC Symbol;Acc:11343]
Organism:Ferret (Mustela putorius furo)
Coordinates:GL897060.1:4362470..4392002(+)


>ENSMPUG00000016432
AGTACCCGCGCCTGGAATCGGGTCGCAACCCCAGCCGCGCTTGCCGCCTGCCACTGCCTCTGGACCATGGACCCCCGCAA
AGTGAGCGAGCTTCGGGCTTTCGTGAAAATGTGTAAGCAGGATCCGAGCGTTCTGCACACCGAGGAAATGCGTTTCCTGC
GGGAGTGGGTGGAGAGCATGGGGGGTAAAATACCACCTGCCACTCATAAAACTAAATCAGAAGACAGTATCAAGGAAGAA
AAACCAGATAGTAAGAAGGCGGAGGAAAACATAAAGACAGATGAACCATCAAGTGAGGAGAGTGATCTAGAAATTGACAA
TGAAGGTGTGATTGAACCAGATACCGATGCCCCTCAAGAAATGGGAGATGAAAATGCAGAGATAACCGAGGAAATGATGG
ATCAGGCAAATGATAAAAAAGTGGCTGCCATTGATGCCCTAAATGATGGTGAACTACAGAAAGCCATTGACTTGTTCACA
GATGCCATCAAACTAAATCCTCGCTTGGCCATTCTGTATGCCAAGAGAGCCAGTGTCTTCATCAAATTACAGAAGCCAAA
TGCTGCCATTCGAGACTGTGACAGAGCTATTGAAATAAATCCTGATTCAGCTCAGCCTTATAAGTGGCGCGGGAAAGCAC
ATAGACTTCTGGGCCATTGGGAAGAAGCAGCACATGATCTTGCCCTTGCTTGCAAACTGGATTATGATGAAGATGCTAGT
GCGATGCTGAAAGAAGTTCAACCGAGGGCCCAAAAAATTGCTGAACATCGGAGAAAATACGAGCGAAAACGTGAAGAGCG
AGAGATCAAAGAAAGAATAGAAAGGGTTAAGAAGGCTCGGGAAGAACACGAGAGAGCCCAGAGGGAGGAAGAAGCCAGGC
GACAATCAGGAGCTCAGTATGGCTCTTTCCCAGGTGGCTTTCCTGGGGGAATGCCCGGTAATTTTCCTGGAGGAATGCCT
GGAATGGCAGGGGGGATGCCTGGAATGGCAGGAATGCCTGGGCTCAATGAAATTCTTAGTGATCCGGAAGTTCTTGCAGC
CATGCAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000005227 possible_ortholog 1 retrogene
retro_acar_2,
Ailuropoda melanoleuca ENSAMEG00000013880 ortholog_one2one 1 retrogene
retro_amel_135,
Bos taurus ENSBTAG00000006202 ortholog_one2many 4 retrogenes
retro_btau_254, retro_btau_427, retro_btau_621, retro_btau_658,
Canis familiaris ENSCAFG00000001139 ortholog_one2one 14 retrogenes
retro_cfam_1029, retro_cfam_1101, retro_cfam_1122, retro_cfam_1239, retro_cfam_1467, retro_cfam_1830, retro_cfam_1950, retro_cfam_1958, retro_cfam_247, retro_cfam_262, retro_cfam_582, retro_cfam_808, retro_cfam_901, retro_cfam_969,
Choloepus hoffmanni ENSCHOG00000012676 ortholog_one2one 1 retrogene
retro_chof_2222,
Callithrix jacchus ENSCJAG00000004644 possible_ortholog 11 retrogenes
retro_cjac_1843, retro_cjac_1953, retro_cjac_2177, retro_cjac_2275, retro_cjac_2789, retro_cjac_3123, retro_cjac_3570, retro_cjac_4019, retro_cjac_488, retro_cjac_640, retro_cjac_685,
Cavia porcellus ENSCPOG00000002290 possible_ortholog 4 retrogenes
retro_cpor_1394, retro_cpor_1477, retro_cpor_166, retro_cpor_961,
Felis catus ENSFCAG00000011847 ortholog_one2one 2 retrogenes
retro_fcat_920, retro_fcat_987,
Gorilla gorilla ENSGGOG00000026747 possible_ortholog 16 retrogenes
retro_ggor_1600, retro_ggor_1734, retro_ggor_1791, retro_ggor_1975, retro_ggor_2177, retro_ggor_2634, retro_ggor_2692, retro_ggor_277, retro_ggor_3045, retro_ggor_629, retro_ggor_666, retro_ggor_749, retro_ggor_788, retro_ggor_832, retro_ggor_833, retro_ggor_938,
Myotis lucifugus ENSMLUG00000007764 possible_ortholog 2 retrogenes
retro_mluc_1088, retro_mluc_2021,
Macaca mulatta ENSMMUG00000019118 possible_ortholog 3 retrogenes
retro_mmul_1842, retro_mmul_402, retro_mmul_438,
Monodelphis domestica ENSMODG00000013042 ortholog_one2many 2 retrogenes
retro_mdom_1087, retro_mdom_31,
Otolemur garnettii ENSOGAG00000016932 ortholog_one2many 1 retrogene
retro_ogar_224,
Pongo abelii ENSPPYG00000011858 possible_ortholog 14 retrogenes
retro_pabe_1004, retro_pabe_2181, retro_pabe_2361, retro_pabe_2657, retro_pabe_2885, retro_pabe_3183, retro_pabe_3673, retro_pabe_3794, retro_pabe_437, retro_pabe_554, retro_pabe_727, retro_pabe_763, retro_pabe_798, retro_pabe_880,
Sarcophilus harrisii ENSSHAG00000000319 ortholog_one2many 2 retrogenes
retro_shar_70, retro_shar_767,
Ictidomys tridecemlineatus ENSSTOG00000003165 possible_ortholog 1 retrogene
retro_itri_88,
Tursiops truncatus ENSTTRG00000011510 ortholog_one2one 5 retrogenes
retro_ttru_1245, retro_ttru_1425, retro_ttru_1615, retro_ttru_385, retro_ttru_670,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mputfur_211 85.85 58.17
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2. retro_mputfur_212 92.80 75.07
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3. retro_mputfur_233 97.99 100.00
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4. retro_mputfur_272 67.46 58.45
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5. retro_mputfur_282 89.97 93.98
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6. retro_mputfur_289 87.56 59.60
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7. retro_mputfur_343 86.61 100.00
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8. retro_mputfur_373 82.04 91.98
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9. retro_mputfur_379 89.01 54.44
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10. retro_mputfur_402 96.75 88.25
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11. retro_mputfur_450 93.41 77.94
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12. retro_mputfur_506 82.79 87.97
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13. retro_mputfur_605 88.83 51.29
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14. retro_mputfur_778 96.57 100.00
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15. retro_mputfur_1640 87.43 100.00
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Download FASTA sequences of all ENSMPUG00000016432 retrocopies