Parental gene:

Actr1a, ENSMUSG00000025228

Aliases:Actr1a, Arp1, alpha-Arp1
Description:ARP1 actin-related protein 1A, centractin alpha [Source:MGI Symbol;Acc:MGI:1858964]
Organism:Mouse (Mus musculus)
Coordinates:19:46376813..46395735(-)


>ENSMUSG00000025228
ATGGAGTCCTACGATGTGATCGCCAACCAGCCTGTTGTGATCGACAACGGATCCGGTGTGATTAAAGCTGGCTTTGCTGG
TGATCAGATCCCCAAATACTGCTTTCCAAACTATGTGGGCAGACCCAAACATGTTCGTGTCATGGCAGGAGCCCTGGAAG
GTGACATCTTCATTGGCCCCAAAGCGGAGGAGCACCGGGGGCTGCTGTCAATCCGTTACCCCATGGAACATGGCATCGTC
AAGGACTGGAACGACATGGAACGCATCTGGCAATACGTCTACTCTAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCC
TGTGCTCCTAACGGAGGCACCTTTAAACCCTCGGAAAAACCGGGAGCGAGCTGCAGAAGTCTTCTTCGAGACCTTCAATG
TGCCGGCCCTCTTCATCTCCATGCAAGCCGTGCTGAGCCTTTATGCCACGGGCAGAACCACAGGCGTGGTGTTGGATTCT
GGGGATGGTGTCACCCATGCAGTCCCGATTTATGAAGGCTTCGCCATGCCTCACTCCATCATGCGCATCGACATCGCTGG
CCGGGATGTCTCACGCTTCCTCCGCCTCTACCTACGGAAGGAGGGCTATGATTTCCACTCCTCCTCTGAGTTTGAGATTG
TCAAGGCCATAAAGGAAAGAGCTTGCTACCTGTCCATAAACCCCCAGAAGGATGAGACACTGGAGACAGAGAAGGCTCAG
TACTACCTGCCCGATGGCAGCACCATTGAGATTGGCCCTTCCCGGTTCCGGGCCCCTGAGCTGCTGTTCAGGCCGGACTT
GATTGGCGAGGAGAGTGAAGGCATCCACGAGGTGCTGGTGTTTGCTATCCAGAAGTCAGACATGGATTTACGGCGTACAC
TGTTTTCCAACATTGTCCTCTCAGGAGGTTCTACCCTGTTCAAAGGTTTTGGAGACAGGCTACTGAGTGAAGTGAAGAAA
CTAGCTCCAAAAGACGTGAAGATCAGGATATCTGCACCCCAGGAGAGACTGTATTCCACATGGATTGGAGGTTCTATCCT
TGCTTCCCTGGACACCTTTAAGAAGATGTGGGTCTCTAAGAAAGAATATGAAGAAGACGGTGCCCGATCCATCCACAGGA
AAACCTTCTAA

Library Parental gene expression (RPM)
SRP007412_brain 173 .40 RPM
SRP007412_cerebellum 174 .16 RPM
SRP007412_heart 109 .92 RPM
SRP007412_kidney 106 .87 RPM
SRP007412_liver 67 .48 RPM
SRP007412_testis 268 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000138107 ortholog_one2one 1 retrogene
retro_hsap_2141,
Mus musculus ENSMUSG00000029580 other_paralog 7 retrogenes
retro_mmus_1613, retro_mmus_1677, retro_mmus_283, retro_mmus_2880, retro_mmus_3411, retro_mmus_3532, retro_mmus_761,
Mus musculus ENSMUSG00000062825 other_paralog 7 retrogenes
retro_mmus_1043, retro_mmus_1524, retro_mmus_2383, retro_mmus_3128, retro_mmus_3265, retro_mmus_3607, retro_mmus_3705,
Nomascus leucogenys ENSNLEG00000015157 ortholog_one2one 1 retrogene
retro_nleu_2751,
Pongo abelii ENSPPYG00000002605 ortholog_one2one 1 retrogene
retro_pabe_1930,
Pan troglodytes ENSPTRG00000002894 ortholog_one2one 1 retrogene
retro_ptro_1567,
Drosophila melanogaster FBgn0011745 ortholog_one2many 1 retrogene
retro_dmel_80,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2686 73.63 52.66
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Download FASTA sequences of all ENSMUSG00000025228 retrocopies