Parental gene: | Actg1, ENSMUSG00000062825 |
| Aliases: | Actg1, AL023024, Actg, Actl, E51 |
| Description: | actin, gamma, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:87906] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:120345689..120348542(-) |
>ENSMUSG00000062825
ATGGAAGAAGAAATCGCCGCACTCGTCATTGACAATGGCTCCGGCATGTGCAAAGCCGGCTTTGCTGGCGACGACGCCCC
CAGGGCCGTGTTCCCTTCCATCGTAGGGCGCCCCCGACACCAGGGCGTCATGGTGGGCATGGGCCAGAAAGACTCATACG
TGGGTGACGAGGCCCAGAGCAAGAGGGGTATCCTGACCCTGAAGTACCCTATCGAACACGGCATTGTCACTAACTGGGAC
GACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCTCCTGAGGAGCACCCGGTGCTTCTGACCGA
GGCCCCCCTGAACCCCAAAGCTAACAGAGAGAAGATGACGCAGATAATGTTTGAAACCTTCAATACCCCAGCCATGTACG
TGGCCATTCAGGCGGTGCTGTCCTTGTATGCATCTGGGCGCACCACTGGCATTGTCATGGACTCTGGTGACGGGGTCACA
CACACAGTGCCCATCTATGAGGGCTACGCCCTTCCCCACGCCATCTTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGA
CTACCTCATGAAGATCCTGACTGAACGGGGCTACAGCTTTACCACCACTGCTGAGAGGGAAATTGTTCGTGACATAAAGG
AGAAGCTGTGCTATGTTGCCCTGGATTTTGAGCAAGAAATGGCTACTGCTGCATCATCTTCCTCCTTGGAGAAGAGTTAC
GAGCTGCCCGACGGGCAGGTGATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCACTCTTCCAGCCTTCCTTCCT
GGGCATGGAGTCCTGTGGTATCCATGAGACCACTTTCAACTCCATCATGAAGTGTGATGTGGATATCCGCAAAGACCTGT
ATGCCAATACAGTGCTGTCTGGTGGTACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATCACAGCCCTA
GCACCTAGCACGATGAAGATTAAGATCATTGCTCCCCCTGAGCGCAAGTACTCAGTCTGGATCGGTGGCTCCATTCTGGC
CTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGATGAGTCAGGCCCCTCCATCGTCCACCGCAAAT
GCTTCTAG
ATGGAAGAAGAAATCGCCGCACTCGTCATTGACAATGGCTCCGGCATGTGCAAAGCCGGCTTTGCTGGCGACGACGCCCC
CAGGGCCGTGTTCCCTTCCATCGTAGGGCGCCCCCGACACCAGGGCGTCATGGTGGGCATGGGCCAGAAAGACTCATACG
TGGGTGACGAGGCCCAGAGCAAGAGGGGTATCCTGACCCTGAAGTACCCTATCGAACACGGCATTGTCACTAACTGGGAC
GACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTGGCTCCTGAGGAGCACCCGGTGCTTCTGACCGA
GGCCCCCCTGAACCCCAAAGCTAACAGAGAGAAGATGACGCAGATAATGTTTGAAACCTTCAATACCCCAGCCATGTACG
TGGCCATTCAGGCGGTGCTGTCCTTGTATGCATCTGGGCGCACCACTGGCATTGTCATGGACTCTGGTGACGGGGTCACA
CACACAGTGCCCATCTATGAGGGCTACGCCCTTCCCCACGCCATCTTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGA
CTACCTCATGAAGATCCTGACTGAACGGGGCTACAGCTTTACCACCACTGCTGAGAGGGAAATTGTTCGTGACATAAAGG
AGAAGCTGTGCTATGTTGCCCTGGATTTTGAGCAAGAAATGGCTACTGCTGCATCATCTTCCTCCTTGGAGAAGAGTTAC
GAGCTGCCCGACGGGCAGGTGATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCACTCTTCCAGCCTTCCTTCCT
GGGCATGGAGTCCTGTGGTATCCATGAGACCACTTTCAACTCCATCATGAAGTGTGATGTGGATATCCGCAAAGACCTGT
ATGCCAATACAGTGCTGTCTGGTGGTACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATCACAGCCCTA
GCACCTAGCACGATGAAGATTAAGATCATTGCTCCCCCTGAGCGCAAGTACTCAGTCTGGATCGGTGGCTCCATTCTGGC
CTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGATGAGTCAGGCCCCTCCATCGTCCACCGCAAAT
GCTTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 87 .12 RPM |
| SRP007412_cerebellum | 43 .55 RPM |
| SRP007412_heart | 49 .59 RPM |
| SRP007412_kidney | 94 .88 RPM |
| SRP007412_liver | 11 .31 RPM |
| SRP007412_testis | 97 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000015238 | ortholog_one2one | 3 retrogenes | |
| Ailuropoda melanoleuca | ENSAMEG00000016015 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002885 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000012101 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000018600 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000026434 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000184009 | ortholog_one2one | 10 retrogenes | |
| Gallus gallus | ENSGALG00000028749 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014043 | ortholog_one2one | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000009167 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002647 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011610 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000025228 | other_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000029580 | within_species_paralog | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015506 | possible_ortholog | 3 retrogenes | |
| Petromyzon marinus | ENSPMAG00000004161 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008735 | ortholog_one2one | 11 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000002102 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000036701 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000028355 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006868 | possible_ortholog | 2 retrogenes | |
| Xenopus tropicalis | ENSXETG00000025116 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1043 | 96.81 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1524 | 96.50 | 98.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2383 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_3128 | 97.83 | 98.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_3265 | 94.74 | 70.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_3607 | 89.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_3705 | 84.92 | 66.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000062825 retrocopies