Parental gene:

ENSNLEG00000005626

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397269.1:27880881..27886684(+)


>ENSNLEG00000005626
ATGTCCGGAGCCCTTGATGTCCTGCAAATGAAGGAGGAGGATGTCCTTAAGTTCCTTGCAGCAGGAACCCACTTAGGTGG
CACCAATCTTGACTTCCAGATGGAACAGTACATCTATAAAAGGAAAAGTGATGGCATCTATATCATAAATCTGAAGAGGA
CCTGGGAGAAGCTTCTGCTGGCAGCTCGTGCTATTGTTGCCATTGAAAACCCTGCTGATGTCAGTGTTATATCCTCCAGG
AATACTGGCCAGAGGGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCCACTCCAATTGCTGGCCGCTTCACTCCTGGAAC
CTTCACTAACCAGATCCAGGCAGCCTTCCGGGAGCCACGGCTTCTTGTGGTTACTGACCCCAGGGCTGACCACCAGCCTC
TCACGGAGGCATCTTACGTTAACCTACCTACCATCGCGCTGTGTAACACAGATTCTCCTCTGCGCTATGTGGACATTGCC
ATCCCGTGCAACAACAAGGGAGCTCACTCAGTGGGTTTGATGTGGTGGATGCTGGCTCGGGAAGTTCTGCGCATGCGTGG
CACCATTTCCCGTGAACACCCATGGGAGGTCATGCCTGATCTCTACTTCTACAGAGATCCTGAAGAGATTGAAAAAGAAG
AGCAGGCTGCTGCTGAAAAGGCAGTGACCAAGGAGGAATTTCAGGGTGAATGGACTGCTCCAGCTCCTGAGTTCACTGCT
ACTCAGCCTGAGGTTGCAGACTGGTCTGAAGGTGTACAGGTGCCCTCTGTGCCTATTCAGCAGTTCCCTACTGAAGACTG
GAGCGCTCAGCCTGCCACAGAAGACTGGTCTGCAGCTCCCACTGCTCAGGCCACTGAATGGGTAGGAGCAACCACTGACT
GGTCTTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004183 possible_ortholog 1 retrogene
retro_acar_140,
Ailuropoda melanoleuca ENSAMEG00000008962 possible_ortholog 13 retrogenes
retro_amel_1091, retro_amel_1276, retro_amel_1357, retro_amel_1432, retro_amel_1446, retro_amel_1497, retro_amel_1634, retro_amel_1817, retro_amel_1857, retro_amel_196, retro_amel_430, retro_amel_808, retro_amel_943,
Canis familiaris ENSCAFG00000005101 possible_ortholog 27 retrogenes
retro_cfam_1046, retro_cfam_1109, retro_cfam_1173, retro_cfam_1189, retro_cfam_1263, retro_cfam_1288, retro_cfam_1366, retro_cfam_1373, retro_cfam_1435, retro_cfam_1511, retro_cfam_1534, retro_cfam_1545, retro_cfam_1555, retro_cfam_1679, retro_cfam_1770, retro_cfam_1814, retro_cfam_1957, retro_cfam_1990, retro_cfam_2140, retro_cfam_512, retro_cfam_820, retro_cfam_828, retro_cfam_854, retro_cfam_928, retro_cfam_957, retro_cfam_980, retro_cfam_994,
Callithrix jacchus ENSCJAG00000009675 possible_ortholog 15 retrogenes
retro_cjac_1113, retro_cjac_1572, retro_cjac_1595, retro_cjac_2265, retro_cjac_2438, retro_cjac_2500, retro_cjac_2502, retro_cjac_2750, retro_cjac_2897, retro_cjac_305, retro_cjac_3160, retro_cjac_4124, retro_cjac_53, retro_cjac_732, retro_cjac_958,
Dasypus novemcinctus ENSDNOG00000004048 possible_ortholog 27 retrogenes
retro_dnov_1022, retro_dnov_108, retro_dnov_1099, retro_dnov_1219, retro_dnov_1372, retro_dnov_1431, retro_dnov_1614, retro_dnov_184, retro_dnov_1913, retro_dnov_1974, retro_dnov_1987, retro_dnov_1988, retro_dnov_2067, retro_dnov_2200, retro_dnov_2224, retro_dnov_2309, retro_dnov_2339, retro_dnov_2469, retro_dnov_2480, retro_dnov_375, retro_dnov_42, retro_dnov_456, retro_dnov_465, retro_dnov_663, retro_dnov_800, retro_dnov_895, retro_dnov_940,
Equus caballus ENSECAG00000013062 possible_ortholog 5 retrogenes
retro_ecab_193, retro_ecab_453, retro_ecab_46, retro_ecab_592, retro_ecab_71,
Echinops telfairi ENSETEG00000018160 possible_ortholog 4 retrogenes
retro_etel_1399, retro_etel_1665, retro_etel_1960, retro_etel_92,
Felis catus ENSFCAG00000002739 possible_ortholog 22 retrogenes
retro_fcat_1119, retro_fcat_1127, retro_fcat_1239, retro_fcat_1353, retro_fcat_1595, retro_fcat_1668, retro_fcat_1694, retro_fcat_1720, retro_fcat_1758, retro_fcat_1804, retro_fcat_1807, retro_fcat_1861, retro_fcat_1970, retro_fcat_239, retro_fcat_258, retro_fcat_384, retro_fcat_391, retro_fcat_551, retro_fcat_682, retro_fcat_722, retro_fcat_793, retro_fcat_906,
Homo sapiens ENSG00000168028 ortholog_one2many 2 retrogenes
retro_hsap_107, retro_hsap_3015,
Loxodonta africana ENSLAFG00000032009 possible_ortholog 5 retrogenes
retro_lafr_1234, retro_lafr_367, retro_lafr_806, retro_lafr_863, retro_lafr_997,
Mustela putorius furo ENSMPUG00000002463 possible_ortholog 21 retrogenes
retro_mputfur_1045, retro_mputfur_1143, retro_mputfur_1194, retro_mputfur_1227, retro_mputfur_1311, retro_mputfur_1318, retro_mputfur_1427, retro_mputfur_1502, retro_mputfur_1558, retro_mputfur_1584, retro_mputfur_288, retro_mputfur_358, retro_mputfur_423, retro_mputfur_477, retro_mputfur_515, retro_mputfur_560, retro_mputfur_576, retro_mputfur_712, retro_mputfur_733, retro_mputfur_932, retro_mputfur_953,
Mus musculus ENSMUSG00000032518 possible_ortholog 1 retrogene
retro_mmus_219,
Pan troglodytes ENSPTRG00000022841 ortholog_one2many 1 retrogene
retro_ptro_14,
Pteropus vampyrus ENSPVAG00000007794 possible_ortholog 19 retrogenes
retro_pvam_1189, retro_pvam_1249, retro_pvam_1335, retro_pvam_1403, retro_pvam_1406, retro_pvam_1443, retro_pvam_1446, retro_pvam_396, retro_pvam_499, retro_pvam_532, retro_pvam_548, retro_pvam_60, retro_pvam_635, retro_pvam_650, retro_pvam_789, retro_pvam_889, retro_pvam_896, retro_pvam_898, retro_pvam_98,
Rattus norvegicus ENSRNOG00000018645 possible_ortholog 27 retrogenes
retro_rnor_1004, retro_rnor_1114, retro_rnor_1119, retro_rnor_1213, retro_rnor_1301, retro_rnor_1396, retro_rnor_1481, retro_rnor_1634, retro_rnor_1778, retro_rnor_1840, retro_rnor_1886, retro_rnor_2068, retro_rnor_2153, retro_rnor_2329, retro_rnor_2384, retro_rnor_2444, retro_rnor_2553, retro_rnor_2554, retro_rnor_2589, retro_rnor_2637, retro_rnor_2649, retro_rnor_2701, retro_rnor_2810, retro_rnor_2912, retro_rnor_2958, retro_rnor_645, retro_rnor_702,
Vicugna pacos ENSVPAG00000012307 possible_ortholog 4 retrogenes
retro_vpac_22, retro_vpac_293, retro_vpac_440, retro_vpac_553,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_254 73.93 86.10
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2. retro_nleu_275 81.33 50.85
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3. retro_nleu_307 78.93 100.00
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4. retro_nleu_309 80.34 100.00
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5. retro_nleu_310 97.53 95.93
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6. retro_nleu_336 66.81 77.97
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7. retro_nleu_339 81.97 98.98
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8. retro_nleu_508 81.53 53.22
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9. retro_nleu_591 71.07 65.76
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10. retro_nleu_598 86.99 98.98
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11. retro_nleu_705 82.78 89.49
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12. retro_nleu_718 83.04 95.93
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13. retro_nleu_740 86.34 54.58
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14. retro_nleu_877 92.93 95.93
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15. retro_nleu_883 93.66 95.93
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16. retro_nleu_925 76.88 61.36
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17. retro_nleu_950 97.25 98.64
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18. retro_nleu_1204 93.24 95.25
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19. retro_nleu_1277 95.74 79.32
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20. retro_nleu_1278 81.76 50.17
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21. retro_nleu_1462 87.50 64.41
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22. retro_nleu_1564 71.84 69.83
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23. retro_nleu_1607 70.05 69.49
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24. retro_nleu_1635 82.33 95.59
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25. retro_nleu_1719 89.75 95.93
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26. retro_nleu_1769 83.42 64.41
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27. retro_nleu_1837 78.49 63.05
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28. retro_nleu_1885 98.23 95.93
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29. retro_nleu_1924 97.29 100.00
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30. retro_nleu_1983 88.89 51.19
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31. retro_nleu_2020 82.73 93.56
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32. retro_nleu_2035 96.13 95.93
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33. retro_nleu_2036 93.99 95.93
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34. retro_nleu_2172 94.74 95.93
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35. retro_nleu_2289 72.16 58.98
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36. retro_nleu_2298 88.34 95.93
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37. retro_nleu_2343 89.69 98.64
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38. retro_nleu_2450 73.74 66.78
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39. retro_nleu_2579 80.12 55.93
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40. retro_nleu_2624 96.83 95.93
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41. retro_nleu_2650 61.49 53.22
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42. retro_nleu_2662 89.78 76.27
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43. retro_nleu_2693 88.15 90.51
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44. retro_nleu_2837 94.51 80.34
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45. retro_nleu_2849 88.73 95.93
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46. retro_nleu_2912 86.62 95.93
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47. retro_nleu_3057 84.02 65.42
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48. retro_nleu_3060 77.94 95.25
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49. retro_nleu_3098 82.81 64.75
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Download FASTA sequences of all ENSNLEG00000005626 retrocopies