Parental gene:

ENSLAFG00000032009

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_36:716758..722859(-)


>ENSLAFG00000032009
ATGTCCGGAGCCCTTGATGTCCTGCAGATGAAGGAGGAGGATGTCCTCAAATTTCTTGCAGCAGGAACGCACTTAGGTGG
CACCAACCTTGACTTCCAGATGGAACAGTACATCTACAAAAGGAAAAGTGATGGCATCTACATCATAAACCTGAAGAGGA
CCTGGGAGAAGCTTCTGTTGGCAGCTCGGGCCATTGTTGCCATTGAAAATCCGGCTGACGTCAGTGTCATATCCTCCAGG
AACACTGGCCAGCGGGCTGTGCTGAAGTTTGCCGCTGCCACTGGTGCCACCCCGATTGCTGGGCGCTTCACTCCGGGAAC
CTTCACTAACCAGATCCAGGCAGCCTTCCGTGAGCCGCGTCTTCTGGTGGTTACCGATCCCAGGGCCGACCACCAGCCTC
TCACAGAGGCGTCCTACGTGAACCTGCCCACCATTGCTCTGTGTAACACAGATTCTCCTCTGCGCTATGTGGACATTGCT
ATCCCGTGCAACAATAAGGGAGCGCACTCGGTGGGTCTGATGTGGTGGATGCTGGCCCGGGAAGTTCTGCGCATGCGGGG
TACCATCTCCCGGGAGCACCCGTGGGAGGTCATGCCTGACCTGTACTTCTACAGAGATCCCGAAGAGATTGAAAAGGAAG
AGCAGGCTGCTGCTGAAAAGGCTGTCACCAAGGAAGAATTTCAGGGTGAATGGACTGCTCCTGCTCCTGAATTTACTGCG
GCTCAGCCTGAGGTTGCAGACTGGTCTGAAGGCGTGCAGGTGCCCTCTGTGCCCATTCAGCAGTTCCCTACTGAAGACTG
GAGTGCTCAGCCTGCAACTGAAGACTGGTCGGCAGCCCCCACCGCTCAGGCCACCGAGTGGGTGGGAACTACCACTGAGT
GGTCTTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004183 possible_ortholog 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000008962 possible_ortholog 13 retrogenes
Bos taurus ENSBTAG00000009757 ortholog_one2one 19 retrogenes
Canis familiaris ENSCAFG00000005101 possible_ortholog 27 retrogenes
Callithrix jacchus ENSCJAG00000009675 possible_ortholog 15 retrogenes
Cavia porcellus ENSCPOG00000008715 possible_ortholog 7 retrogenes
Dasypus novemcinctus ENSDNOG00000004048 ortholog_one2many 27 retrogenes
Dipodomys ordii ENSDORG00000008267 possible_ortholog 1 retrogene
Equus caballus ENSECAG00000013062 possible_ortholog 5 retrogenes
Erinaceus europaeus ENSEEUG00000005292 possible_ortholog 2 retrogenes
Echinops telfairi ENSETEG00000018160 ortholog_one2one 4 retrogenes
Felis catus ENSFCAG00000002739 possible_ortholog 22 retrogenes
Homo sapiens ENSG00000168028 possible_ortholog 2 retrogenes
Gorilla gorilla ENSGGOG00000015038 possible_ortholog 11 retrogenes
Macropus eugenii ENSMEUG00000008169 possible_ortholog 14 retrogenes
Microcebus murinus ENSMICG00000004518 possible_ortholog 32 retrogenes
Macaca mulatta ENSMMUG00000007930 possible_ortholog 2 retrogenes
Macaca mulatta ENSMMUG00000022965 possible_ortholog 19 retrogenes
Monodelphis domestica ENSMODG00000010967 possible_ortholog 2 retrogenes
Mustela putorius furo ENSMPUG00000002463 possible_ortholog 21 retrogenes
Mus musculus ENSMUSG00000032518 ortholog_one2many 1 retrogene
Nomascus leucogenys ENSNLEG00000005626 possible_ortholog 49 retrogenes
Otolemur garnettii ENSOGAG00000028830 possible_ortholog 8 retrogenes
Ochotona princeps ENSOPRG00000004505 possible_ortholog 16 retrogenes
Pongo abelii ENSPPYG00000013993 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000022841 possible_ortholog 1 retrogene
Pteropus vampyrus ENSPVAG00000007794 ortholog_one2one 19 retrogenes
Rattus norvegicus ENSRNOG00000018645 ortholog_one2one 27 retrogenes
Sorex araneus ENSSARG00000014402 possible_ortholog 10 retrogenes
Sarcophilus harrisii ENSSHAG00000006896 possible_ortholog 2 retrogenes
Sus scrofa ENSSSCG00000011266 possible_ortholog 9 retrogenes
Tupaia belangeri ENSTBEG00000015946 possible_ortholog 54 retrogenes
Tarsius syrichta ENSTSYG00000004458 possible_ortholog 6 retrogenes
Tursiops truncatus ENSTTRG00000014496 ortholog_one2one 24 retrogenes
Vicugna pacos ENSVPAG00000012307 possible_ortholog 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_367 72.73 59.73
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2. retro_lafr_806 96.47 95.93
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3. retro_lafr_863 73.40 100.00
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4. retro_lafr_997 82.08 71.67
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5. retro_lafr_1234 78.79 100.00
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Download FASTA sequences of all ENSLAFG00000032009 retrocopies