Parental gene:

ENSOCUG00000007729

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:5:24841378..24894871(+)


>ENSOCUG00000007729
ATGGCGACTGCGGAAGCGAGCGGCAGCGACGGGAAAGGGCAAGGGGGCGAGACCTCCGTCACCTATTACCGGCTGGAGGA
GGTGGCCAAGCGCAACTCCCCGAAGGACCTGTGGCTGGTGATCCACGGGCGGGTCTACGATATCACCCGCTTCCTCAACG
AGCACCCTGGTGGGGAGGAAGTTCTGCTGGAACAAGCTGGCGTAGATGCAAGCGAGAGCTTTGAAGATGTCGGCCATTCC
TCTGATGCCAGAGAGATGCTAAAGCAGTACTACATTGGTGATGTCCACCCGAGTGACCTTAAACCTGGGAGTGGCAGACA
GAACCCTTCGGGAAAGAATGCATGCAAACGTTGCTGGAAATATTGGATTCTCCCCATCCTAGGCGCTGTTCTCATAGGTT
TCCTGTATCGTCACTACACGTCGGAAAGCAGATCCTCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 17 .38 RPM
SRP017611_kidney 48 .85 RPM
SRP017611_liver 9 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000007518 ortholog_one2many 1 retrogene
retro_apla_13,
Cavia porcellus ENSCPOG00000014234 possible_ortholog 1 retrogene
retro_cpor_1117,
Dasypus novemcinctus ENSDNOG00000008313 ortholog_one2many 9 retrogenes
retro_dnov_1424, retro_dnov_2077, retro_dnov_2123, retro_dnov_2310, retro_dnov_2684, retro_dnov_2685, retro_dnov_706, retro_dnov_716, retro_dnov_728,
Felis catus ENSFCAG00000024541 ortholog_one2many 1 retrogene
retro_fcat_1816,
Homo sapiens ENSG00000103018 ortholog_one2many 1 retrogene
retro_hsap_1493,
Gallus gallus ENSGALG00000000660 ortholog_one2many 1 retrogene
retro_ggal_13,
Gorilla gorilla ENSGGOG00000015031 ortholog_one2many 1 retrogene
retro_ggor_1146,
Meleagris gallopavo ENSMGAG00000008619 ortholog_one2many 1 retrogene
retro_mgal_12,
Myotis lucifugus ENSMLUG00000006608 ortholog_one2many 1 retrogene
retro_mluc_1734,
Macaca mulatta ENSMMUG00000012039 ortholog_one2many 1 retrogene
retro_mmul_128,
Mus musculus ENSMUSG00000031924 possible_ortholog 1 retrogene
retro_mmus_2289,
Nomascus leucogenys ENSNLEG00000005515 ortholog_one2many 1 retrogene
retro_nleu_1715,
Pongo abelii ENSPPYG00000007506 ortholog_one2many 1 retrogene
retro_pabe_1243,
Pan troglodytes ENSPTRG00000008282 ortholog_one2many 1 retrogene
retro_ptro_1012,
Pteropus vampyrus ENSPVAG00000015984 ortholog_one2many 1 retrogene
retro_pvam_977,
Sarcophilus harrisii ENSSHAG00000014200 ortholog_many2many 1 retrogene
retro_shar_688,
Ictidomys tridecemlineatus ENSSTOG00000011316 possible_ortholog 1 retrogene
retro_itri_1296,
Tarsius syrichta ENSTSYG00000014292 ortholog_one2many 1 retrogene
retro_tsyr_2171,
Tursiops truncatus ENSTTRG00000010016 ortholog_one2many 1 retrogene
retro_ttru_521,
Drosophila melanogaster FBgn0029854 possible_ortholog 1 retrogene
retro_dmel_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_141 89.04 100.00
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2. retro_ocun_255 58.10 71.92
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Download FASTA sequences of all ENSOCUG00000007729 retrocopies