Parental gene:

CYB5B, ENSPTRG00000008282

Aliases:None
Description:Pan troglodytes cytochrome b5 type B (CYB5B), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001242609]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:68756229..68798048(+)


>ENSPTRG00000008282
ATGTCCGGTTCAATGGCGACTGCGGAAGCTAGCGGCAGCGATGGGAAAGGGCAGGAAGTCGAGACCTCAGTCACCTATTA
CCGGTTGGAGGAGGTGGCAAAGCGCAACTCCTTGAAGGAACTGTGGCTTGTGATCCATGGGCGAGTCTACGATGTCACCC
GCTTCCTCAACGAGCACCCTGGAGGAGAAGAGGTTCTGCTGGAACAAGCCGGTGTAGATGCAAGTGAAAGCTTTGAAGAT
GTAGGACACTCTTCTGATGCCAGAGAAATGCTAAAGCAGTACTATATTGGTGATATCCATCCGAGTGACCTTAAACCTGA
AAGTGGTAGCAAGGACCCTTCAAAAAATGATACATGCAAAAGTTGCTGGGCATATTGGATTTTACCCATCATAGGCGCTG
TTCTCTTAGGTTTCCTGTACCGCTACTACACATCGGAAAGCAAATCCTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 53 .41 RPM
SRP007412_cerebellum 32 .19 RPM
SRP007412_heart 31 .89 RPM
SRP007412_kidney 50 .63 RPM
SRP007412_liver 39 .38 RPM
SRP007412_testis 40 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000007518 ortholog_one2one 1 retrogene
retro_apla_13,
Dasypus novemcinctus ENSDNOG00000008313 ortholog_one2one 9 retrogenes
retro_dnov_1424, retro_dnov_2077, retro_dnov_2123, retro_dnov_2310, retro_dnov_2684, retro_dnov_2685, retro_dnov_706, retro_dnov_716, retro_dnov_728,
Felis catus ENSFCAG00000024541 ortholog_one2one 1 retrogene
retro_fcat_1816,
Homo sapiens ENSG00000103018 ortholog_one2one 1 retrogene
retro_hsap_1493,
Gallus gallus ENSGALG00000000660 ortholog_one2one 1 retrogene
retro_ggal_13,
Gorilla gorilla ENSGGOG00000015031 ortholog_one2one 1 retrogene
retro_ggor_1146,
Meleagris gallopavo ENSMGAG00000008619 ortholog_one2one 1 retrogene
retro_mgal_12,
Myotis lucifugus ENSMLUG00000006608 ortholog_one2one 1 retrogene
retro_mluc_1734,
Macaca mulatta ENSMMUG00000012039 ortholog_one2one 1 retrogene
retro_mmul_128,
Nomascus leucogenys ENSNLEG00000005515 ortholog_one2one 1 retrogene
retro_nleu_1715,
Oryctolagus cuniculus ENSOCUG00000007729 ortholog_one2many 2 retrogenes
retro_ocun_141, retro_ocun_255,
Pongo abelii ENSPPYG00000007506 ortholog_one2one 1 retrogene
retro_pabe_1243,
Pan troglodytes ENSPTRG00000010111 within_species_paralog 3 retrogenes
retro_ptro_1421, retro_ptro_898, retro_ptro_943,
Pteropus vampyrus ENSPVAG00000015984 ortholog_one2one 1 retrogene
retro_pvam_977,
Sarcophilus harrisii ENSSHAG00000014200 ortholog_one2many 1 retrogene
retro_shar_688,
Tarsius syrichta ENSTSYG00000014292 ortholog_one2one 1 retrogene
retro_tsyr_2171,
Tursiops truncatus ENSTTRG00000010016 ortholog_one2one 1 retrogene
retro_ttru_521,
Drosophila melanogaster FBgn0029854 possible_ortholog 1 retrogene
retro_dmel_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1012 69.54 100.00
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Download FASTA sequences of all ENSPTRG00000008282 retrocopies