Parental gene:

RAC1, ENSOCUG00000009956

Aliases:None
Description:ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018931:160142..179145(-)


>ENSOCUG00000009956
GCTGTGGGTAAGACTTGCCTGCTGATCAGCTACACGACCAATGCGTTCCCTGGAGAGTACATCCCCACTGTCTTTGACAA
CTATTCTGCCAATGTTATGGTAGATGGAAAACCAGTGAATCTGGGCTTATGGGATACAGCCGGACAAGAAGATTATGACA
GGTTACGGCCCCTGTCCTACCCACAAACAGTTGGAGAAACGTATGGTAAGGACATTACGTCCAGGGGCAGAGACAAGCCG
ATTGCCGACGTCTTCTTGATTTGCTTTTCCCTTGTGAGTCCTGCGTCGTTTGAAAATGTCCGAGCGAAGTGGTACCCTGA
AGTGCGACACCATTGTCCCAACACGCCCATCATCCTCGTGGGAACGAAACTGGATCTTCGGGATGATAAAGACACGATTG
AGAAACTGAAGGAGAAGAAGCTGACACCCATCACCTACCCGCAGGGCTTGGCCATGGCCAAGGAGATCGGTGCTGTGAAA
TACCTGGAGTGCTCGGCCCTCACGCAGCGAGGCCTCAAGACAGTGTTCGACGAGGCGATCCGAGCGGTCCTCTGCCCGCC
CCCCGTCAAGAAGAGGAAGAGGAAGTGCCTGCTGCTGTGA

Library Parental gene expression (RPM)
SRP017611_liver 45 .86 RPM
SRP017611_kidney 95 .78 RPM
SRP017611_brain 129 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009233 ortholog_one2one 2 retrogenes
retro_btau_1601, retro_btau_332,
Canis familiaris ENSCAFG00000015716 ortholog_one2one 1 retrogene
retro_cfam_496,
Gorilla gorilla ENSGGOG00000026733 possible_ortholog 2 retrogenes
retro_ggor_2110, retro_ggor_217,
Macaca mulatta ENSMMUG00000021075 ortholog_one2one 4 retrogenes
retro_mmul_1310, retro_mmul_1964, retro_mmul_2642, retro_mmul_721,
Oryctolagus cuniculus ENSOCUG00000009986 other_paralog 1 retrogene
retro_ocun_60,
Oryctolagus cuniculus ENSOCUG00000016115 within_species_paralog 1 retrogene
retro_ocun_43,
Pan troglodytes ENSPTRG00000018910 possible_ortholog 4 retrogenes
retro_ptro_1288, retro_ptro_3044, retro_ptro_3274, retro_ptro_36,
Tupaia belangeri ENSTBEG00000007272 possible_ortholog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,
Xenopus tropicalis ENSXETG00000027593 ortholog_one2one 1 retrogene
retro_xtro_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_305 91.80 93.78
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Download FASTA sequences of all ENSOCUG00000009956 retrocopies