Parental gene:

RPS21, ENSOGAG00000016673

Aliases:None
Description:ribosomal protein S21 [Source:HGNC Symbol;Acc:10409]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873542.1:21426368..21427435(+)


>ENSOGAG00000016673
ATGCAGAACGACGCCGGCGAGTTCGTGGACCTATACGTGCCGCGGAAATGCTCCGCTAGCAACCGCATCATCGGTGCTAA
GGACCACGCATCCATCCAGATGAACGTGGCTGAGGTTGACAAGGTTACCGGCAGATTTAATGGCCAGTTTAAAACCTATG
CTATCTGTGGGGCCATTCGCAGGATGGGTGAATCAGATGATTCCATTCTTCGATTGGCCAAAGCTGATGGCATCGTTTCA
AAGAATTTCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017399 possible_ortholog 2 retrogenes
retro_amel_1783, retro_amel_87,
Bos taurus ENSBTAG00000020795 ortholog_one2one 2 retrogenes
retro_btau_174, retro_btau_1780,
Canis familiaris ENSCAFG00000012676 possible_ortholog 4 retrogenes
retro_cfam_1055, retro_cfam_1687, retro_cfam_1896, retro_cfam_28,
Callithrix jacchus ENSCJAG00000014195 ortholog_one2many 5 retrogenes
retro_cjac_2266, retro_cjac_2572, retro_cjac_629, retro_cjac_82, retro_cjac_884,
Homo sapiens ENSG00000171858 ortholog_one2one 6 retrogenes
retro_hsap_1179, retro_hsap_1883, retro_hsap_2300, retro_hsap_2949, retro_hsap_3026, retro_hsap_4303,
Gorilla gorilla ENSGGOG00000023745 possible_ortholog 7 retrogenes
retro_ggor_131, retro_ggor_1380, retro_ggor_1647, retro_ggor_2043, retro_ggor_2089, retro_ggor_2875, retro_ggor_917,
Latimeria chalumnae ENSLACG00000012753 ortholog_one2many 1 retrogene
retro_lcha_124,
Monodelphis domestica ENSMODG00000016769 ortholog_one2one 1 retrogene
retro_mdom_464,
Mus musculus ENSMUSG00000039001 ortholog_one2one 11 retrogenes
retro_mmus_1100, retro_mmus_1324, retro_mmus_1482, retro_mmus_1510, retro_mmus_1688, retro_mmus_1837, retro_mmus_2039, retro_mmus_2071, retro_mmus_2243, retro_mmus_576, retro_mmus_992,
Ornithorhynchus anatinus ENSOANG00000003361 ortholog_one2one 2 retrogenes
retro_oana_102, retro_oana_107,
Pongo abelii ENSPPYG00000011205 possible_ortholog 8 retrogenes
retro_pabe_1562, retro_pabe_157, retro_pabe_2446, retro_pabe_2505, retro_pabe_3503, retro_pabe_365, retro_pabe_710, retro_pabe_986,
Pan troglodytes ENSPTRG00000013708 ortholog_one2many 1 retrogene
retro_ptro_42,
Rattus norvegicus ENSRNOG00000006325 ortholog_one2many 2 retrogenes
retro_rnor_128, retro_rnor_172,
Sus scrofa ENSSSCG00000021825 possible_ortholog 1 retrogene
retro_sscr_7,
Ictidomys tridecemlineatus ENSSTOG00000001029 possible_ortholog 5 retrogenes
retro_itri_1027, retro_itri_1487, retro_itri_637, retro_itri_82, retro_itri_849,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_719 54.12 100.00
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2. retro_ogar_1013 65.82 92.77
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3. retro_ogar_1339 65.75 83.13
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4. retro_ogar_1742 75.90 98.80
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5. retro_ogar_2111 98.80 100.00
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6. retro_ogar_2176 75.00 79.52
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7. retro_ogar_2532 97.59 100.00
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8. retro_ogar_2703 64.63 98.80
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9. retro_ogar_2921 67.06 100.00
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10. retro_ogar_3119 69.44 84.34
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11. retro_ogar_3214 80.95 100.00
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12. retro_ogar_3256 84.52 100.00
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Download FASTA sequences of all ENSOGAG00000016673 retrocopies