Parental gene: | ENSOGAG00000031228 |
| Aliases: | None |
| Description: | None |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873650.1:4919843..4935013(-) |
>ENSOGAG00000031228
ATGTCAGACTCAAATCATGGTAACAGCCAGAAGAATGTCTCTGTGGAGGACATAGATGATGAAGAAAGTGTGATTTTGAC
ATTGGTTCCAGTTAAAGATGATTTAGATGATTCAAATAATGAACAAATCGAATCAACTGTTTCTTCAACTTCTGATGTCA
CACTGAACAATCCCCAGAAATACAATGAAGTTCATCTACCTCCAACAAATAAGCAACCAAAAGTCATCCGAAGAGCTAGA
TGTAAAAAATCTGATCTTCCCTTGCCAACCGTTTTGCCTTCCATTAATGATGTGGGTCGAGACACTTTGAGGAACTGGTG
CCAGCAACTCAACTTGAGTACTGATGGCAAGAAAACAGAAGTTTTTCTGAGGCTTCAGGAGCATGCCTTTCCTGAACAGA
AATGTGTAATTCCTGAAACACCAAAGGAGGCCAGATTACATTCATGTTCAAGGAAACTCAAAGCAGAGACCAAGAGAGCA
AGACCTCAGGAAAGGTCCAAGATGAGTGTGAAAACAGAAGAGCTCAATAGAGTAGAAGTGATAACATCAGCCCAGGAATC
TGCATTGGCATCGTGGGCAAGGATTGCTGCCAAAGCTGGTCAGCCTAAGACTATGAATTCACGGTCTATTCCTGCTTCTG
CTGAGGCCTTTTTGATGCCTTCCCCAGGCCTTAGGTGGTGTGTGATCCATGGCGAGCCTCTCCCCGCAGACAGAGAGGGT
TGGGTCCGCCTACAGTTTCATGCAGGTCAGGCCTGGGTGCCTGCCACTCCCAGGAGGATGATTTCCCTCTTCCTGTTACC
AGCCTGCATTTTCCCATCTCCAGGCCTAGAAGATAATATGTTATGTCCTGACTGTGCTAAGAGAAATAAGAAGATAATGA
AAAGATTAATGATAGCGAAGAGG
ATGTCAGACTCAAATCATGGTAACAGCCAGAAGAATGTCTCTGTGGAGGACATAGATGATGAAGAAAGTGTGATTTTGAC
ATTGGTTCCAGTTAAAGATGATTTAGATGATTCAAATAATGAACAAATCGAATCAACTGTTTCTTCAACTTCTGATGTCA
CACTGAACAATCCCCAGAAATACAATGAAGTTCATCTACCTCCAACAAATAAGCAACCAAAAGTCATCCGAAGAGCTAGA
TGTAAAAAATCTGATCTTCCCTTGCCAACCGTTTTGCCTTCCATTAATGATGTGGGTCGAGACACTTTGAGGAACTGGTG
CCAGCAACTCAACTTGAGTACTGATGGCAAGAAAACAGAAGTTTTTCTGAGGCTTCAGGAGCATGCCTTTCCTGAACAGA
AATGTGTAATTCCTGAAACACCAAAGGAGGCCAGATTACATTCATGTTCAAGGAAACTCAAAGCAGAGACCAAGAGAGCA
AGACCTCAGGAAAGGTCCAAGATGAGTGTGAAAACAGAAGAGCTCAATAGAGTAGAAGTGATAACATCAGCCCAGGAATC
TGCATTGGCATCGTGGGCAAGGATTGCTGCCAAAGCTGGTCAGCCTAAGACTATGAATTCACGGTCTATTCCTGCTTCTG
CTGAGGCCTTTTTGATGCCTTCCCCAGGCCTTAGGTGGTGTGTGATCCATGGCGAGCCTCTCCCCGCAGACAGAGAGGGT
TGGGTCCGCCTACAGTTTCATGCAGGTCAGGCCTGGGTGCCTGCCACTCCCAGGAGGATGATTTCCCTCTTCCTGTTACC
AGCCTGCATTTTCCCATCTCCAGGCCTAGAAGATAATATGTTATGTCCTGACTGTGCTAAGAGAAATAAGAAGATAATGA
AAAGATTAATGATAGCGAAGAGG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020460 | ortholog_many2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020168 | ortholog_one2many | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010745 | ortholog_one2many | 6 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008944 | ortholog_one2many | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000007985 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000163530 | ortholog_one2many | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000013744 | ortholog_one2many | 6 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007444 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022112 | ortholog_many2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000018083 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000072419 | ortholog_one2many | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004020 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003175 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005059 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013566 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000015199 | ortholog_one2many | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017398 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006212 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009500 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_586 | 74.47 | 93.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_1678 | 82.10 | 76.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_1722 | 84.30 | 56.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_1953 | 70.14 | 69.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ogar_2404 | 85.05 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ogar_2567 | 73.14 | 94.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ogar_2900 | 85.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000031228 retrocopies