Parental gene:

RBBP4, ENSPCAG00000011030

Aliases:None
Description:retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_6250:19951..33557(+)


>ENSPCAG00000011030
ATGGCCGACAAGGAAGCAGCCTTTGATGATGCCGTGGAAGAACGTGTGATCAACGAGGAGTATAAAATATGGAAAAAGAA
CACCCCTTTTCTTTATGATTTGGTGATGACCCATGCTCTGGAGTGGCCAAGCCTAACTGCACAGTGGCTTCCAGATGTAA
CCAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCCTGGGAACACACACTTCAGATGAACAAAACCACCTTGTG
ATAGCCAGTGTGCAGCTTCCTAATGATGATGCGCAGTTTGATGCATCACACTATGACAGTGAGAAAGGAGAATTTGGAGG
TTTTGGCTCCGTTAGTGGAAAGATTGAAATAGAAATCAAGATCAACCACGAGGGAGAAGTCAACAGGGCCCGTTACATGC
CCCAGAACCCTTGCATCATTGCAACAAAGACTCCGTCCAGTGATGTTCTTGTTTTTGACTACACCAAACACCCTTCTAAA
CCAGACCCTTCTGGAGAGTGCAACCCAGACTTGCGTCTCCGTGGACATCAGAAAGAAGGTTATGGGCTTTCTTGGAACCC
AAATCTCAGTGGACACTTACTTAGTGCTTCAGATGACCATACTATCTGCCTATGGGACATCAGTGCTGTCCCAAAAGAAG
GAAAAGTGGTGGATGCAAAGACCATCTTTACTGGACACACAGCAGTGGTTGAAGATGTTTCTTGGCATCTGCTCCATGAG
TCTCTCTTTGGGTCTGTTGCTGATGATCAGAAACTTATGATCTGGGATACTCGTTCAAATAATACTTCCAAACCAAGCCA
CTCAGTTGACGCTCACACTGCTGAAGTGAACTGCCTGTCCTTTAATCCTTATAGTGAATTCATTCTTGCCACAGGATCAG
CTGACAAGACTGTTGCTTTGTGGGATCTGAGAAATCTGAAACTCAAGTTGCATTCCTTTGAATCGCATAAGGATGAGATA
TTCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGAGCTGTTGTTTATTCATGGTGGTCACA
CTGCCAAAATATCTGATTTTTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGACAATATCATGCAA
GTGTGGCAGATG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001021 possible_ortholog 7 retrogenes
retro_cjac_1157, retro_cjac_1787, retro_cjac_1873, retro_cjac_244, retro_cjac_2557, retro_cjac_2719, retro_cjac_2939,
Cavia porcellus ENSCPOG00000015352 possible_ortholog 3 retrogenes
retro_cpor_154, retro_cpor_27, retro_cpor_899,
Macaca mulatta ENSMMUG00000009940 possible_ortholog 1 retrogene
retro_mmul_75,
Monodelphis domestica ENSMODG00000017415 ortholog_one2one 6 retrogenes
retro_mdom_1542, retro_mdom_1833, retro_mdom_1873, retro_mdom_1900, retro_mdom_563, retro_mdom_765,
Mustela putorius furo ENSMPUG00000015214 possible_ortholog 1 retrogene
retro_mputfur_104,
Petromyzon marinus ENSPMAG00000007189 ortholog_one2many 1 retrogene
retro_pmar_26,
Rattus norvegicus ENSRNOG00000021492 possible_ortholog 1 retrogene
retro_rnor_1270,
Sarcophilus harrisii ENSSHAG00000010923 possible_ortholog 1 retrogene
retro_shar_399,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_116 69.83 56.93
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Download FASTA sequences of all ENSPCAG00000011030 retrocopies