Parental gene:

ENSPPYG00000000768

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:1:96514121..96518846(-)


>ENSPPYG00000000768
ATGTCGCACAAACAAATTTACTATTCGGACAAATACGACGACGAGGAGTTTGAGTATCGACATGTCATGCTGCCCAAGGA
CATAGCCAAGCTGGTCCCTAAAACCCATTTGATGTCTGAATCTGAATGGAGGAATCTTGGCGTTCAGCAGAGTCAGGGAT
GGGTCCATTATATGATCCATGAACCAGAACCTCACATCTTGCTGTTCCGGCGCCCACTACCCAAGAAACCAAAGAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .81 RPM
SRP007412_cerebellum 1 .58 RPM
SRP007412_heart 5 .54 RPM
SRP007412_kidney 8 .49 RPM
SRP007412_liver 8 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000003764 possible_ortholog 6 retrogenes
retro_dord_25, retro_dord_290, retro_dord_599, retro_dord_64, retro_dord_647, retro_dord_739,
Equus caballus ENSECAG00000003460 ortholog_one2one 1 retrogene
retro_ecab_975,
Echinops telfairi ENSETEG00000003337 ortholog_one2one 4 retrogenes
retro_etel_1246, retro_etel_1938, retro_etel_239, retro_etel_497,
Felis catus ENSFCAG00000001347 ortholog_one2one 1 retrogene
retro_fcat_1041,
Homo sapiens ENSG00000173207 ortholog_one2many 1 retrogene
retro_hsap_27,
Loxodonta africana ENSLAFG00000032213 ortholog_one2one 1 retrogene
retro_lafr_243,
Mus musculus ENSMUSG00000028044 ortholog_one2one 1 retrogene
retro_mmus_280,
Nomascus leucogenys ENSNLEG00000011532 ortholog_one2one 3 retrogenes
retro_nleu_1098, retro_nleu_2592, retro_nleu_411,
Oryctolagus cuniculus ENSOCUG00000016204 ortholog_one2one 2 retrogenes
retro_ocun_1389, retro_ocun_18,
Otolemur garnettii ENSOGAG00000006384 possible_ortholog 10 retrogenes
retro_ogar_1673, retro_ogar_1703, retro_ogar_1713, retro_ogar_1983, retro_ogar_2317, retro_ogar_245, retro_ogar_3310, retro_ogar_450, retro_ogar_530, retro_ogar_877,
Pongo abelii ENSPPYG00000025843 within_species_paralog 1 retrogene
retro_pabe_57,
Pan troglodytes ENSPTRG00000001398 ortholog_one2one 4 retrogenes
retro_ptro_2769, retro_ptro_3100, retro_ptro_558, retro_ptro_944,
Rattus norvegicus ENSRNOG00000042561 ortholog_one2one 1 retrogene
retro_rnor_97,
Sorex araneus ENSSARG00000012383 ortholog_one2one 2 retrogenes
retro_sara_667, retro_sara_77,
Sus scrofa ENSSSCG00000029737 ortholog_one2one 1 retrogene
retro_sscr_730,
Vicugna pacos ENSVPAG00000012182 ortholog_one2one 1 retrogene
retro_vpac_532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_717 94.94 100.00
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2. retro_pabe_1143 89.87 100.00
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3. retro_pabe_3625 96.20 100.00
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Download FASTA sequences of all ENSPPYG00000000768 retrocopies