Parental gene:

CKS2, ENSPPYG00000025843

Aliases:None
Description:CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000]
Organism:Orangutan (Pongo abelii)
Coordinates:9:84768880..84774293(+)


>ENSPPYG00000025843
ATGGCCCACAAGCAGATCTACTACTCGGACAAGTACTTCGACGAACACTACGAGTACCGGCATGTTATGTTACCCAGAGA
ACTTTCCAAACAAGTACCTAAAACTCATCTGATGTCTGAAGAGGAGTGGAGGAGACTTGGTGTCCAACAGAGTCTAGGCT
GGGTTCATTACATGATTCATGAGCCAGAACCACATATTCTTCTGTTTAGACGACCTCTTCCAAAAGATCAACAAAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .12 RPM
SRP007412_heart 0 .18 RPM
SRP007412_kidney 2 .55 RPM
SRP007412_liver 0 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002194 ortholog_one2many 2 retrogenes
retro_cfam_1495, retro_cfam_472,
Callithrix jacchus ENSCJAG00000007792 possible_ortholog 1 retrogene
retro_cjac_261,
Dasypus novemcinctus ENSDNOG00000009427 ortholog_one2one 8 retrogenes
retro_dnov_1200, retro_dnov_1527, retro_dnov_195, retro_dnov_1984, retro_dnov_2530, retro_dnov_2532, retro_dnov_585, retro_dnov_755,
Erinaceus europaeus ENSEEUG00000004384 ortholog_one2one 7 retrogenes
retro_eeur_183, retro_eeur_255, retro_eeur_293, retro_eeur_551, retro_eeur_632, retro_eeur_639, retro_eeur_640,
Echinops telfairi ENSETEG00000001260 ortholog_one2many 10 retrogenes
retro_etel_1194, retro_etel_1752, retro_etel_1839, retro_etel_229, retro_etel_590, retro_etel_704, retro_etel_717, retro_etel_721, retro_etel_838, retro_etel_979,
Felis catus ENSFCAG00000022286 ortholog_one2many 1 retrogene
retro_fcat_1875,
Homo sapiens ENSG00000123975 ortholog_one2one 1 retrogene
retro_hsap_4183,
Macaca mulatta ENSMMUG00000012534 possible_ortholog 1 retrogene
retro_mmul_269,
Mus musculus ENSMUSG00000062248 ortholog_one2many 4 retrogenes
retro_mmus_1356, retro_mmus_1470, retro_mmus_2392, retro_mmus_409,
Nomascus leucogenys ENSNLEG00000008729 possible_ortholog 1 retrogene
retro_nleu_1793,
Otolemur garnettii ENSOGAG00000028843 possible_ortholog 1 retrogene
retro_ogar_798,
Ochotona princeps ENSOPRG00000007583 ortholog_one2one 3 retrogenes
retro_opri_111, retro_opri_1122, retro_opri_912,
Pongo abelii ENSPPYG00000000768 within_species_paralog 3 retrogenes
retro_pabe_1143, retro_pabe_3625, retro_pabe_717,
Pan troglodytes ENSPTRG00000021093 ortholog_one2one 1 retrogene
retro_ptro_2837,
Pteropus vampyrus ENSPVAG00000011011 possible_ortholog 3 retrogenes
retro_pvam_1297, retro_pvam_1307, retro_pvam_605,
Rattus norvegicus ENSRNOG00000014130 ortholog_many2many 5 retrogenes
retro_rnor_1209, retro_rnor_1909, retro_rnor_2742, retro_rnor_279, retro_rnor_402,
Sorex araneus ENSSARG00000002443 ortholog_one2one 1 retrogene
retro_sara_213,
Sus scrofa ENSSSCG00000021161 possible_ortholog 2 retrogenes
retro_sscr_458, retro_sscr_675,
Ictidomys tridecemlineatus ENSSTOG00000000048 ortholog_one2many 7 retrogenes
retro_itri_1058, retro_itri_1306, retro_itri_1429, retro_itri_1632, retro_itri_269, retro_itri_585, retro_itri_774,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_57 100.00 100.00
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Download FASTA sequences of all ENSPPYG00000025843 retrocopies