Parental gene:

PPIH, ENSPPYG00000001467

Aliases:None
Description:peptidylprolyl isomerase H (cyclophilin H) [Source:HGNC Symbol;Acc:14651]
Organism:Orangutan (Pongo abelii)
Coordinates:1:187382969..187403202(-)


>ENSPPYG00000001467
ATGGCGGTGGCAAATTCAAGTCCTGTTAACCCCGTGGTGTTCTTTGATGTCAGCATTGGCGGTCAGGAAGTTGGCCGCAT
GAAGATCGAGCTCTTTGCAGACGTTGTGCCTAAGACGGCCGAGAACTTTAGGCAGTTCTGCACCGGAGAATTCAGAAAAG
ATGGGGTTCCAATAGGATACAAAGGAAGCACCTTCCACAGGGTCATAAAGGATTTCATGATTCAGGGTGGAGATTTTGTT
AATGGAGATGGTACTGGAGTCGCCAGTATTTACCGGGGGCCATTTGCCGATGAAAATTTTAAACTTAGACACTCAGCTCC
AGGCCTGCTTTCCATGGCGAACAGTGGTCCAAGTACAAATGGCTGTCAGTTCTTTATCACCTGCTCTAAGTGCGATTGGC
TGGATGGGAAGCATGTGGTGTTTGGAAAAATCATCGATGGACTTCTAGTGATGAGAAAGATTGAGAATGTTCCCACAGGC
CCCAACAATAAGCCCAAGCTACCTGTGGTGATCTCGCAGTGTGGGGAGATGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .25 RPM
SRP007412_cerebellum 8 .15 RPM
SRP007412_heart 5 .12 RPM
SRP007412_kidney 10 .44 RPM
SRP007412_liver 9 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000526 ortholog_one2one 1 retrogene
retro_amel_1481,
Bos taurus ENSBTAG00000004590 ortholog_one2one 1 retrogene
retro_btau_1530,
Callithrix jacchus ENSCJAG00000003145 ortholog_one2many 5 retrogenes
retro_cjac_129, retro_cjac_1886, retro_cjac_2205, retro_cjac_3120, retro_cjac_4110,
Cavia porcellus ENSCPOG00000008214 ortholog_one2one 8 retrogenes
retro_cpor_1511, retro_cpor_785, retro_cpor_786, retro_cpor_794, retro_cpor_795, retro_cpor_796, retro_cpor_797, retro_cpor_798,
Dipodomys ordii ENSDORG00000016152 ortholog_one2one 3 retrogenes
retro_dord_151, retro_dord_173, retro_dord_447,
Homo sapiens ENSG00000171960 ortholog_one2one 2 retrogenes
retro_hsap_4740, retro_hsap_928,
Gorilla gorilla ENSGGOG00000022507 ortholog_one2one 2 retrogenes
retro_ggor_2945, retro_ggor_748,
Macropus eugenii ENSMEUG00000001691 ortholog_one2one 1 retrogene
retro_meug_1699,
Myotis lucifugus ENSMLUG00000025400 ortholog_one2one 2 retrogenes
retro_mluc_1922, retro_mluc_2243,
Macaca mulatta ENSMMUG00000013129 ortholog_one2one 1 retrogene
retro_mmul_1124,
Mustela putorius furo ENSMPUG00000013966 ortholog_one2one 2 retrogenes
retro_mputfur_285, retro_mputfur_542,
Nomascus leucogenys ENSNLEG00000012313 ortholog_one2one 2 retrogenes
retro_nleu_1242, retro_nleu_289,
Oryctolagus cuniculus ENSOCUG00000011453 ortholog_one2one 1 retrogene
retro_ocun_1195,
Procavia capensis ENSPCAG00000011139 ortholog_one2one 1 retrogene
retro_pcap_81,
Pongo abelii ENSPPYG00000016554 within_species_paralog 1 retrogene
retro_pabe_2009,
Pan troglodytes ENSPTRG00000000614 ortholog_one2one 2 retrogenes
retro_ptro_3155, retro_ptro_644,
Pteropus vampyrus ENSPVAG00000005500 ortholog_one2one 1 retrogene
retro_pvam_107,
Ictidomys tridecemlineatus ENSSTOG00000000115 ortholog_one2one 2 retrogenes
retro_itri_1248, retro_itri_412,
Tarsius syrichta ENSTSYG00000003182 ortholog_one2one 2 retrogenes
retro_tsyr_224, retro_tsyr_647,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_797 87.64 100.00
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2. retro_pabe_3686 80.79 99.44
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Download FASTA sequences of all ENSPPYG00000001467 retrocopies