Parental gene: | MORF4L1, ENSPPYG00000006703 |
| Aliases: | None |
| Description: | mortality factor 4-like protein 1 [Source:RefSeq peptide;Acc:NP_001127679] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 15:76310146..76340477(+) |
>ENSPPYG00000006703
ATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGTGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGA
AGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAATACTTTATACATTACAGTGGCTGGAATAAAAATTGGG
ATGAGTGGGTTCCGGAGAGCAGAGTACTCAAATACGTGGACACCAATTTGCAGAAACAGCGAGAACTTCAAAAAGCCAAT
CAGGAGCAGTATGCAGAGGGGAAGATGAGAGGGGCTGCCCCAGGAAAGAAGACATCTGGTCTGCAACAGAAAAATGTTGA
AGTGAAAACAAAAAAGAACAAACAGAAAACACCTGGAAATGGAGATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTC
GGAAGAAAAGGGCCCGGGTAGATCCTACTGTTGAAAATGAGGAAACGTTCATGAACAGAGTTGAAGTTAAAGTAAAGATT
CCTGAAGAGCTAAAACCATGGCTTGTTGATGACTGGGACTTAATTACCAGGCAAAAACAGCTCTTTTATCTTCCTGCCAA
GAAGAATGTGGATTCCATTCTTGAGGATTATGCAAATTACAAGAAATCTCGTGGAAACACAGATAATAAGGAGTATGCGG
TTAATGAAGTTGTGGCAGGGATAAAAGAATACTTCAACGTAATGTTGGGTACCCAGCTACTCTACAAATTTGAGAGACCA
CAGTATGCCGAAATTCTTGCTGATCATCCCGATGCACCCATGTCCCAGGTGTATGGAGCGCCACATCTCCTGAGATTATT
TGTACGAATTGGAGCAATGTTGGCCTATACACCTCTGGATGAGAAGAGCCTTGCTTTATTACTCAACTATCTTCACGATT
TCCTAAAGTACCTGGCAAAGAATTCTGCAACTTTGTTTAGTGCCAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGG
AAAGCTGTGTGA
ATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGTGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGA
AGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAATACTTTATACATTACAGTGGCTGGAATAAAAATTGGG
ATGAGTGGGTTCCGGAGAGCAGAGTACTCAAATACGTGGACACCAATTTGCAGAAACAGCGAGAACTTCAAAAAGCCAAT
CAGGAGCAGTATGCAGAGGGGAAGATGAGAGGGGCTGCCCCAGGAAAGAAGACATCTGGTCTGCAACAGAAAAATGTTGA
AGTGAAAACAAAAAAGAACAAACAGAAAACACCTGGAAATGGAGATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTC
GGAAGAAAAGGGCCCGGGTAGATCCTACTGTTGAAAATGAGGAAACGTTCATGAACAGAGTTGAAGTTAAAGTAAAGATT
CCTGAAGAGCTAAAACCATGGCTTGTTGATGACTGGGACTTAATTACCAGGCAAAAACAGCTCTTTTATCTTCCTGCCAA
GAAGAATGTGGATTCCATTCTTGAGGATTATGCAAATTACAAGAAATCTCGTGGAAACACAGATAATAAGGAGTATGCGG
TTAATGAAGTTGTGGCAGGGATAAAAGAATACTTCAACGTAATGTTGGGTACCCAGCTACTCTACAAATTTGAGAGACCA
CAGTATGCCGAAATTCTTGCTGATCATCCCGATGCACCCATGTCCCAGGTGTATGGAGCGCCACATCTCCTGAGATTATT
TGTACGAATTGGAGCAATGTTGGCCTATACACCTCTGGATGAGAAGAGCCTTGCTTTATTACTCAACTATCTTCACGATT
TCCTAAAGTACCTGGCAAAGAATTCTGCAACTTTGTTTAGTGCCAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGG
AAAGCTGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 236 .75 RPM |
| SRP007412_cerebellum | 215 .60 RPM |
| SRP007412_heart | 107 .35 RPM |
| SRP007412_kidney | 131 .66 RPM |
| SRP007412_liver | 81 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012344 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000010988 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014113 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002214 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000185787 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016826 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000009851 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022926 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000011517 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015429 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000062270 | ortholog_one2one | 9 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008678 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000015117 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006047 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000007351 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014410 | ortholog_one2one | 6 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000018402 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001769 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013294 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_201 | 80.66 | 75.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_695 | 86.69 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1046 | 63.64 | 50.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2581 | 94.74 | 87.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000006703 retrocopies