Parental gene: | MORF4L1, ENSPTRG00000007351 |
| Aliases: | None |
| Description: | mortality factor 4 like 1 [Source:HGNC Symbol;Acc:16989] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 15:76510603..76536079(+) |
>ENSPTRG00000007351
ATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGTGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGA
AGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAATACTTCATACATTACAGTGGTTGGAATAAAAAAAGTG
CTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACATGAGGATATTGTAGCCCTTTTTCCTGTTCCTGAAGGAGCT
CCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGGATGAGTGGGTTCCGGAGAGCAGAGTACTCAAATACGTGGACAC
CAATTTGCAGAAACAGCGAGAACTTCAAAAAGCCAATCAGGAGCAGTATGCAGAGGGGAAGATGAGAGGGGCTGCCCCAG
GAAAGAAGACATCTGGTCTGCAACAGAAAAATGTTGAAGTGAAAACGAAAAAGAACAAACAGAAAACACCTGGAAATGGA
GATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCGGAAGAAAAGGGCCCGGGTAGATCCTACTGTTGAAAATGAGGA
AACATTCATGAACAGAGTTGAAGTTAAAGTAAAGATTCCTGAAGAGCTAAAACCGTGGCTTGTTGATGACTGGGACTTAA
TTACCAGGCAAAAACAGCTCTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTCTTGAGGATTATGCAAATTACAAG
AAATCTCGTGGAAACACAGATAATAAGGAGTATGCGGTTAATGAAGTTGTGGCAGGGATAAAAGAATACTTCAACGTAAT
GTTGGGTACCCAGCTACTCTATAAATTTGAGAGACCACAGTATGCTGAAATTCTTGCAGATCATCCCGATGCACCCATGT
CCCAGGTGTATGGAGCGCCACATCTCCTGAGATTATTTGTACGAATTGGAGCAATGTTGGCTTATACACCTCTGGATGAG
AAGAGCCTTGCTTTATTACTCAATTATCTTCACGATTTCCTAAAGTACCTGGCAAAGAATTCTGCAACTTTGTTCAGTGC
CAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCTGTGTGA
ATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGTGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGA
AGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAATACTTCATACATTACAGTGGTTGGAATAAAAAAAGTG
CTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACATGAGGATATTGTAGCCCTTTTTCCTGTTCCTGAAGGAGCT
CCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGGATGAGTGGGTTCCGGAGAGCAGAGTACTCAAATACGTGGACAC
CAATTTGCAGAAACAGCGAGAACTTCAAAAAGCCAATCAGGAGCAGTATGCAGAGGGGAAGATGAGAGGGGCTGCCCCAG
GAAAGAAGACATCTGGTCTGCAACAGAAAAATGTTGAAGTGAAAACGAAAAAGAACAAACAGAAAACACCTGGAAATGGA
GATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCGGAAGAAAAGGGCCCGGGTAGATCCTACTGTTGAAAATGAGGA
AACATTCATGAACAGAGTTGAAGTTAAAGTAAAGATTCCTGAAGAGCTAAAACCGTGGCTTGTTGATGACTGGGACTTAA
TTACCAGGCAAAAACAGCTCTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTCTTGAGGATTATGCAAATTACAAG
AAATCTCGTGGAAACACAGATAATAAGGAGTATGCGGTTAATGAAGTTGTGGCAGGGATAAAAGAATACTTCAACGTAAT
GTTGGGTACCCAGCTACTCTATAAATTTGAGAGACCACAGTATGCTGAAATTCTTGCAGATCATCCCGATGCACCCATGT
CCCAGGTGTATGGAGCGCCACATCTCCTGAGATTATTTGTACGAATTGGAGCAATGTTGGCTTATACACCTCTGGATGAG
AAGAGCCTTGCTTTATTACTCAATTATCTTCACGATTTCCTAAAGTACCTGGCAAAGAATTCTGCAACTTTGTTCAGTGC
CAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCTGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 218 .77 RPM |
| SRP007412_cerebellum | 275 .35 RPM |
| SRP007412_heart | 190 .24 RPM |
| SRP007412_kidney | 171 .95 RPM |
| SRP007412_liver | 120 .00 RPM |
| SRP007412_testis | 893 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012344 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000010988 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014113 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002214 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000185787 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016826 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000009851 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022926 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000011517 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015429 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000062270 | ortholog_one2one | 9 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008678 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000015117 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006047 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000006703 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014410 | ortholog_one2one | 6 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000018402 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001769 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013294 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_47 | 80.66 | 67.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_591 | 77.90 | 76.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2114 | 86.07 | 77.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000007351 retrocopies