Parental gene:

MORF4L1, ENSSSCG00000001769

Aliases:None
Description:mortality factor 4 like 1 [Source:HGNC Symbol;Acc:16989]
Organism:Pig (Sus scrofa)
Coordinates:7:53588317..53613979(+)


>ENSSSCG00000001769
ATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGGGTGAGCGAGTGCTGTGCTTTCATGGGCCTCTTCTTTATGA
AGCAAAGTGTGTAAAGGTTGCCATAAAGGATAAACAAGTGAAATACTTTATACATTACAGTGGTTGGAATAAAAAAAGTG
CTGTGAGGCCCAGGCGCTCTGAAAAAACTTTGAAGAGACGTGAGGATATTGTAGCCCTTTTTCCTGTTCCTGAAGGAGCT
CCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGGATGAATGGGTTCCAGAAAGCAGAGTACTCAAATACGTGGACAC
CAATCTGCAGAAACAACGAGAACTTCAAAAAGCCAATCAGGAGCAGTATGCAGAGGGGAAGATGAGAGGGGCTGCCCCTG
GAAAGAAGACATCTGGTCTGCAACAGAAAAACGTTGAAGTGAAAACAAAAAAGAACAAGCAGAAAACACCTGGAAATGGA
GAAGGTGGGAGTACCAGTGAGACACCTCAGCCTCCTCGCAAGAAAAGGGCCCGAGTAGATCCAACTGTTGAAAATGAGGA
AACATTCATGAACAGAGTTGAAGTTAAAGTAAAGATTCCTGAAGAACTCAAACCATGGCTTGTTGATGACTGGGACTTAA
TCACCCGGCAAAAACAGCTGTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTCTAGAGGATTATGCAAATTACAAA
AAGTCTCGAGGAAACACAGATAATAAGGAGTATGCTGTTAATGAAGTTGTGGCAGGGATAAAGGAATACTTCAATGTAAT
GTTGGGCACTCAGCTACTCTACAAGTTTGAGAGACCACAGTATGCTGAAATTCTCGCCGATCACCCCGATGCGCCCATGT
CCCAGGTGTATGGAGCACCACATCTACTGAGATTATTTGTACGAATTGGAGCAATGTTGGCCTATACACCTCTGGATGAG
AAGAGCCTTGCTTTATTACTGAATTATCTTCACGATTTCCTAAAATACCTGGCAAAGAACTCTGCAACTTTGTTTAGTGC
CAGCGATTATGAAGTTGCTCCTCCTGAGTACCATCGGAAAGCTGTGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 76 .45 RPM
SRP014902_testis 163 .23 RPM
SRP018288_heart 221 .73 RPM
SRP018288_kidney 264 .49 RPM
SRP018288_liver 168 .07 RPM
SRP018288_lung 188 .89 RPM
SRP018856_adipose 373 .82 RPM
SRP035408_brain 301 .95 RPM
SRP035408_liver 249 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012344 ortholog_one2one 1 retrogene
retro_amel_124,
Bos taurus ENSBTAG00000010988 ortholog_one2many 1 retrogene
retro_btau_137,
Canis familiaris ENSCAFG00000014113 ortholog_one2one 1 retrogene
retro_cfam_20,
Callithrix jacchus ENSCJAG00000002214 ortholog_one2many 5 retrogenes
retro_cjac_2113, retro_cjac_2280, retro_cjac_2574, retro_cjac_3026, retro_cjac_3179,
Homo sapiens ENSG00000185787 ortholog_one2one 3 retrogenes
retro_hsap_309, retro_hsap_3125, retro_hsap_850,
Gorilla gorilla ENSGGOG00000016826 ortholog_one2one 3 retrogenes
retro_ggor_125, retro_ggor_2141, retro_ggor_694,
Loxodonta africana ENSLAFG00000009851 ortholog_one2one 1 retrogene
retro_lafr_62,
Macaca mulatta ENSMMUG00000022926 ortholog_one2one 1 retrogene
retro_mmul_1064,
Monodelphis domestica ENSMODG00000011517 possible_ortholog 2 retrogenes
retro_mdom_150, retro_mdom_158,
Mustela putorius furo ENSMPUG00000015429 ortholog_one2one 1 retrogene
retro_mputfur_180,
Mus musculus ENSMUSG00000062270 ortholog_one2one 9 retrogenes
retro_mmus_1454, retro_mmus_1697, retro_mmus_176, retro_mmus_1771, retro_mmus_1825, retro_mmus_1833, retro_mmus_2500, retro_mmus_2612, retro_mmus_289,
Nomascus leucogenys ENSNLEG00000008678 ortholog_one2one 3 retrogenes
retro_nleu_417, retro_nleu_445, retro_nleu_51,
Oryctolagus cuniculus ENSOCUG00000015117 possible_ortholog 2 retrogenes
retro_ocun_108, retro_ocun_21,
Otolemur garnettii ENSOGAG00000006047 ortholog_one2one 4 retrogenes
retro_ogar_1594, retro_ogar_2616, retro_ogar_2896, retro_ogar_50,
Pongo abelii ENSPPYG00000006703 ortholog_one2one 4 retrogenes
retro_pabe_1046, retro_pabe_201, retro_pabe_2581, retro_pabe_695,
Pan troglodytes ENSPTRG00000007351 ortholog_one2one 3 retrogenes
retro_ptro_2114, retro_ptro_47, retro_ptro_591,
Rattus norvegicus ENSRNOG00000014410 ortholog_one2one 6 retrogenes
retro_rnor_1076, retro_rnor_2270, retro_rnor_2357, retro_rnor_374, retro_rnor_793, retro_rnor_980,
Sarcophilus harrisii ENSSHAG00000018402 possible_ortholog 1 retrogene
retro_shar_393,
Ictidomys tridecemlineatus ENSSTOG00000013294 ortholog_one2one 3 retrogenes
retro_itri_111, retro_itri_1545, retro_itri_1608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_93 79.84 75.23
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Download FASTA sequences of all ENSSSCG00000001769 retrocopies