Parental gene:

DYNLT3, ENSPPYG00000020241

Aliases:None
Description:Dynein light chain Tctex-type 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5NVF5]
Organism:Orangutan (Pongo abelii)
Coordinates:X:38343827..38352702(-)


>ENSPPYG00000020241
ATGGAGGAGTACCATCGCCACTGCGACGAGGTTGGCTTCAATGCTGAGGAAGCCCACAATATTGTCAAAGAGTGTGTAGA
TGGGGTTTTAGGTGGTGAAGATTATAATCACAACAACATCAACCAGTGGACCGCAAGCATAGTGGAACAATCCTTAACAC
ATCTGGTTAAGTTGGGAAAAGCTTATAAATATATTGTGACCTGTGCAGTGGTCCAGAAGAGCGCATATGGCTTTCACACA
GCCAGCTCCTGTTTTTGGGATACCACATCTGATGGAACCTGTACCGTAAGATGGGAGAACCGGACCATGAACTGTATTGT
CAATGTTTTTGCCATTGCTATTGTTCTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .64 RPM
SRP007412_cerebellum 19 .33 RPM
SRP007412_heart 8 .28 RPM
SRP007412_kidney 8 .35 RPM
SRP007412_liver 10 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038156 ortholog_one2one 1 retrogene
retro_btau_907,
Canis familiaris ENSCAFG00000013955 ortholog_one2one 1 retrogene
retro_cfam_1778,
Callithrix jacchus ENSCJAG00000005227 ortholog_one2one 1 retrogene
retro_cjac_1247,
Cavia porcellus ENSCPOG00000001932 ortholog_one2many 1 retrogene
retro_cpor_91,
Dasypus novemcinctus ENSDNOG00000014826 ortholog_one2one 1 retrogene
retro_dnov_1638,
Felis catus ENSFCAG00000026355 ortholog_one2one 1 retrogene
retro_fcat_1736,
Homo sapiens ENSG00000165169 ortholog_one2one 2 retrogenes
retro_hsap_2152, retro_hsap_2453,
Macropus eugenii ENSMEUG00000013924 ortholog_one2many 4 retrogenes
retro_meug_1294, retro_meug_1443, retro_meug_33, retro_meug_620,
Microcebus murinus ENSMICG00000001440 ortholog_one2one 1 retrogene
retro_mmur_556,
Myotis lucifugus ENSMLUG00000015093 ortholog_one2one 1 retrogene
retro_mluc_739,
Macaca mulatta ENSMMUG00000013221 ortholog_one2one 1 retrogene
retro_mmul_660,
Monodelphis domestica ENSMODG00000021109 ortholog_one2one 7 retrogenes
retro_mdom_1023, retro_mdom_1145, retro_mdom_1432, retro_mdom_1745, retro_mdom_1748, retro_mdom_376, retro_mdom_935,
Mus musculus ENSMUSG00000031176 ortholog_one2one 1 retrogene
retro_mmus_3147,
Nomascus leucogenys ENSNLEG00000000985 ortholog_one2one 2 retrogenes
retro_nleu_1900, retro_nleu_821,
Oryctolagus cuniculus ENSOCUG00000009787 ortholog_one2one 1 retrogene
retro_ocun_836,
Pongo abelii ENSPPYG00000017135 within_species_paralog 2 retrogenes
retro_pabe_1432, retro_pabe_2424,
Pan troglodytes ENSPTRG00000021793 ortholog_one2one 1 retrogene
retro_ptro_1417,
Rattus norvegicus ENSRNOG00000003611 ortholog_one2one 2 retrogenes
retro_rnor_1462, retro_rnor_652,
Sarcophilus harrisii ENSSHAG00000008069 ortholog_one2one 2 retrogenes
retro_shar_141, retro_shar_825,
Tupaia belangeri ENSTBEG00000014383 ortholog_one2one 2 retrogenes
retro_tbel_3460, retro_tbel_885,
Vicugna pacos ENSVPAG00000006367 ortholog_one2one 1 retrogene
retro_vpac_246,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1804 83.76 100.00
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2. retro_pabe_2098 84.51 60.34
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Download FASTA sequences of all ENSPPYG00000020241 retrocopies