Parental gene: | KRT19, ENSPTRG00000009168 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:15870474..15875268(+) |
>ENSPTRG00000009168
ATGACTTCCTACAGCTATCGCCAGTCGTCGGCCACGTCGTCCTTCGGAGGCCTGGGCGGCGGCTCCGTGCGTTTTGGGCC
GGGGGTCGCCTTTCGCGCGCCCAGCATTCACGGGGGCTCCGGCGGCCGCGGCGTGTCCGTGTCCTCCGCCCGCTTTGTGT
CCTCGTCCTCCTCGGGGGGCTACGGCGGCGGCTACGGCGGCGTCCTGACCGCGTCCGACGGGCTGCTGGCTGGCAACGAG
AAGCTCACCATGCAGAACCTCAACGACCGCCTGGCCTCCTACCTGGACAAGGTGCGCGCCCTGGAGGCGGCCAACGGCGA
GCTGGAGGTGAAGATCCGCGACTGGTACCAGAAGCAGGGGCCTGGGCCCTCCCGCGACTACAGCCACTACTACACGACCA
TCCAGGACCTGCGGGACAAGATTCTTGGTGCCACCATTGAGAACTCCAGGATTGTTCTGCAGATCGACAATGCCCGTCTG
GCTGCAGATGACTTCCGAACCAAGTTTGAGACGGAACAGGCTCTGCGCATGAGCGTGGAGGCCGACATCAACGGCCTGCG
CAGGGTGCTGGATGAGCTGACCCTGGCCAGGACCGACCTGGAGATGCAGATTGAAGGCCTGAAGGAAGAGCTGGCCTACC
TGAAGAAGAACCATGAGGAGGAAATCAATACGCTGAGGGGCCAAGTGGGAGGCCAGGTCAGTGTGGAGGTGGATTCCGCT
CCGGGCACCGATCTCGCCAAGATCCTGAGTGACATGCGAAGCCAATATGAGGTCATGGCCGAGCAGAACCGGAAGGATGC
TGAAGCCTGGTTCACCAGCCGGACTGAAGAATTGAACCGGGAGGTCGCTGGCCACACGGAGCAGCTCCAGATGAGCAGGT
CCGAGGTTACTGACCTGCGGCGCACCCTTCAGGGTCTTGAGATTGAGCTGCAGTCACAGCTGAGCATGAAAGCTGCCTTG
GAAGACACACTGGCAGAAACGGAGGCACGCTTTGGAGCCCAGCTGGCGCATATCCAGGCGCTGATCAGCGGTATTGAAGC
CCAGCTGGGCGATGTGCGAGCTGATAGTGAGCGGCAGAATCAGGAGTACCAGCGGCTCATGGACATCAAGTCGCGGCTGG
AGCAGGAGATTGCCACCTACCGCAGCCTGCTCGAGGGACAGGAAGATCACTACAACAATCTGTCCGCCTCCAAGGTCCTC
TGA
ATGACTTCCTACAGCTATCGCCAGTCGTCGGCCACGTCGTCCTTCGGAGGCCTGGGCGGCGGCTCCGTGCGTTTTGGGCC
GGGGGTCGCCTTTCGCGCGCCCAGCATTCACGGGGGCTCCGGCGGCCGCGGCGTGTCCGTGTCCTCCGCCCGCTTTGTGT
CCTCGTCCTCCTCGGGGGGCTACGGCGGCGGCTACGGCGGCGTCCTGACCGCGTCCGACGGGCTGCTGGCTGGCAACGAG
AAGCTCACCATGCAGAACCTCAACGACCGCCTGGCCTCCTACCTGGACAAGGTGCGCGCCCTGGAGGCGGCCAACGGCGA
GCTGGAGGTGAAGATCCGCGACTGGTACCAGAAGCAGGGGCCTGGGCCCTCCCGCGACTACAGCCACTACTACACGACCA
TCCAGGACCTGCGGGACAAGATTCTTGGTGCCACCATTGAGAACTCCAGGATTGTTCTGCAGATCGACAATGCCCGTCTG
GCTGCAGATGACTTCCGAACCAAGTTTGAGACGGAACAGGCTCTGCGCATGAGCGTGGAGGCCGACATCAACGGCCTGCG
CAGGGTGCTGGATGAGCTGACCCTGGCCAGGACCGACCTGGAGATGCAGATTGAAGGCCTGAAGGAAGAGCTGGCCTACC
TGAAGAAGAACCATGAGGAGGAAATCAATACGCTGAGGGGCCAAGTGGGAGGCCAGGTCAGTGTGGAGGTGGATTCCGCT
CCGGGCACCGATCTCGCCAAGATCCTGAGTGACATGCGAAGCCAATATGAGGTCATGGCCGAGCAGAACCGGAAGGATGC
TGAAGCCTGGTTCACCAGCCGGACTGAAGAATTGAACCGGGAGGTCGCTGGCCACACGGAGCAGCTCCAGATGAGCAGGT
CCGAGGTTACTGACCTGCGGCGCACCCTTCAGGGTCTTGAGATTGAGCTGCAGTCACAGCTGAGCATGAAAGCTGCCTTG
GAAGACACACTGGCAGAAACGGAGGCACGCTTTGGAGCCCAGCTGGCGCATATCCAGGCGCTGATCAGCGGTATTGAAGC
CCAGCTGGGCGATGTGCGAGCTGATAGTGAGCGGCAGAATCAGGAGTACCAGCGGCTCATGGACATCAAGTCGCGGCTGG
AGCAGGAGATTGCCACCTACCGCAGCCTGCTCGAGGGACAGGAAGATCACTACAACAATCTGTCCGCCTCCAAGGTCCTC
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .63 RPM |
| SRP007412_cerebellum | 11 .33 RPM |
| SRP007412_heart | 2 .45 RPM |
| SRP007412_kidney | 92 .97 RPM |
| SRP007412_liver | 5 .53 RPM |
| SRP007412_testis | 0 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000029756 | ortholog_one2one | 9 retrogenes | |
| Equus caballus | ENSECAG00000014086 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000007881 | ortholog_one2many | 6 retrogenes | |
| Homo sapiens | ENSG00000171345 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016901 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000016158 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000018653 | ortholog_one2many | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010787 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016132 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024306 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000007908 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008416 | ortholog_one2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014403 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_430 | 63.46 | 74.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2074 | 78.82 | 50.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2359 | 84.29 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009168 retrocopies