Parental gene: | RAB5C, ENSPTRG00000009194 |
| Aliases: | None |
| Description: | Pan troglodytes RAB5C, member RAS oncogene family (RAB5C), mRNA. [Source:RefSeq mRNA;Acc:NM_001246383] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:15239680..15269881(+) |
>ENSPTRG00000009194
ATGGCGGGTCGGGGAGGCGCAGCACGACCCAATGGACCAGCTGCTGGGAACAAGATCTGTCAATTTAAGCTGGTTCTGCT
GGGGGAGTCTGCGGTAGGCAAATCCAGCCTCGTCCTCCGCTTTGTCAAGGGACAGTTTCACGAGTACCAGGAGAGCACAA
TTGGAGCGGCCTTCCTCACACAGACTGTCTGCCTGGATGACACAACGGTCAAGTTTGAGATCTGGGACACAGCTGGACAG
GAGCGGTATCACAGCCTGGCCCCCATGTACTATCGGGGGGCCCAGGCTGCCATCGTGGTCTATGACATCACCAACACAGA
TACATTTGCACGGGCCAAGAACTGGGTGAAGGAGCTACAGAGGCAGGCCAGCCCCAACATCGTCATTGCACTCGCGGGTA
ACAAGGCAGACCTGGCCAGCAAGAGAGCCGTGGAATTCCAGGAAGCACAAGCCTATGCAGACGACAACAGTTTGCTGTTC
ATGGAGACATCAGCAAAGACTGCAATGAACGTGAACGAAATCTTCATGGCAATAGCTAAGAAGCTTCCCAAGAACGAGCC
CCAGAATGCAACTGGTGCTCCAGGCCGAAACCGAGGTGTGGACCTCCAGGAGAACAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA
ATGGCGGGTCGGGGAGGCGCAGCACGACCCAATGGACCAGCTGCTGGGAACAAGATCTGTCAATTTAAGCTGGTTCTGCT
GGGGGAGTCTGCGGTAGGCAAATCCAGCCTCGTCCTCCGCTTTGTCAAGGGACAGTTTCACGAGTACCAGGAGAGCACAA
TTGGAGCGGCCTTCCTCACACAGACTGTCTGCCTGGATGACACAACGGTCAAGTTTGAGATCTGGGACACAGCTGGACAG
GAGCGGTATCACAGCCTGGCCCCCATGTACTATCGGGGGGCCCAGGCTGCCATCGTGGTCTATGACATCACCAACACAGA
TACATTTGCACGGGCCAAGAACTGGGTGAAGGAGCTACAGAGGCAGGCCAGCCCCAACATCGTCATTGCACTCGCGGGTA
ACAAGGCAGACCTGGCCAGCAAGAGAGCCGTGGAATTCCAGGAAGCACAAGCCTATGCAGACGACAACAGTTTGCTGTTC
ATGGAGACATCAGCAAAGACTGCAATGAACGTGAACGAAATCTTCATGGCAATAGCTAAGAAGCTTCCCAAGAACGAGCC
CCAGAATGCAACTGGTGCTCCAGGCCGAAACCGAGGTGTGGACCTCCAGGAGAACAACCCAGCCAGCCGGAGCCAGTGCT
GCAGCAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 70 .03 RPM |
| SRP007412_cerebellum | 87 .97 RPM |
| SRP007412_heart | 25 .27 RPM |
| SRP007412_kidney | 168 .23 RPM |
| SRP007412_liver | 114 .70 RPM |
| SRP007412_testis | 31 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000000472 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005472 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005614 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014761 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014792 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008398 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014682 | within_species_paralog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007092 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2237 | 77.89 | 86.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009194 retrocopies