Parental gene:

MCTS1, ENSPTRG00000022241

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:121208642..121217515(+)


>ENSPTRG00000022241
ATGGGCAAAGGAAGATTTGATGAAAAAGAAAATGTGTCCAACTGCATCCAGTTGAAAACTTCAGTTATTAAGGGTATTAA
GAATCAATTGATAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGATCCTGTCAAAATAG
TCCGATGCCATGAACATATAGAAATCCTTACAGTAAATGGAGAATTACTCTTTTTTAGACAAAGAGAAGGGCCTTTTTAT
CCAACCCTAAGATTACTTCACAAATATCCTTTTATCCTGCCACACCAGCAGGTTGATAAAGGAGCCATCAAATTTGTACT
CAGTGGAGCAAATATCATGTGTCCAGGCTTAACTTCTCCTGGAGCTAAGCTTTACCCTGCTGCAGTAGATACCATTGTTG
CTATCATGGCAGAAGGAAAACAGCATGCTCTATGTGTTGGAGTCATGAAGATGTCTGCAGAAGACATTGAGAAAGTCAAC
AAAGGAATTGGCATTGAAAATATCCATTATTTAAATGATGGGCTGTGGCATATGAAGACATATAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .49 RPM
SRP007412_cerebellum 2 .87 RPM
SRP007412_heart 7 .20 RPM
SRP007412_kidney 9 .62 RPM
SRP007412_liver 5 .76 RPM
SRP007412_testis 2 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000005502 ortholog_one2one 1 retrogene
retro_cpor_1411,
Erinaceus europaeus ENSEEUG00000007258 ortholog_one2one 1 retrogene
retro_eeur_197,
Echinops telfairi ENSETEG00000015462 ortholog_one2one 1 retrogene
retro_etel_19,
Homo sapiens ENSG00000232119 ortholog_one2one 1 retrogene
retro_hsap_2422,
Gorilla gorilla ENSGGOG00000009420 ortholog_one2one 1 retrogene
retro_ggor_1507,
Myotis lucifugus ENSMLUG00000015101 ortholog_one2one 1 retrogene
retro_mluc_16,
Monodelphis domestica ENSMODG00000010354 ortholog_one2one 1 retrogene
retro_mdom_203,
Mus musculus ENSMUSG00000000355 possible_ortholog 3 retrogenes
retro_mmus_2504, retro_mmus_2505, retro_mmus_69,
Oryctolagus cuniculus ENSOCUG00000014315 ortholog_one2one 1 retrogene
retro_ocun_212,
Pteropus vampyrus ENSPVAG00000013249 ortholog_one2one 3 retrogenes
retro_pvam_1323, retro_pvam_645, retro_pvam_867,
Rattus norvegicus ENSRNOG00000002563 ortholog_one2one 2 retrogenes
retro_rnor_1841, retro_rnor_957,
Ictidomys tridecemlineatus ENSSTOG00000011496 possible_ortholog 2 retrogenes
retro_itri_1136, retro_itri_1468,
Tupaia belangeri ENSTBEG00000010666 ortholog_one2one 2 retrogenes
retro_tbel_1485, retro_tbel_4265,
Tarsius syrichta ENSTSYG00000001440 ortholog_one2one 1 retrogene
retro_tsyr_55,
Tursiops truncatus ENSTTRG00000007208 ortholog_one2one 1 retrogene
retro_ttru_1587,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1396 95.03 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000022241 retrocopies