Parental gene: | MCTS1, ENSPVAG00000013249 |
| Aliases: | None |
| Description: | malignant T cell amplified sequence 1 [Source:HGNC Symbol;Acc:23357] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | scaffold_8835:15144..20821(+) |
>ENSPVAG00000013249
ATGGGCGAAGGAAGATTTGATGAAAAAGAAAATGTGTCCAACTGCATCCAGTTGAAAACCTCAGTGATAAAGGGTATTAA
GAACCAATTAATAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGTTCCCGTCAAAATAG
TGCGATGCCATGAACATATAGAAATCCTTACAGTAAATGGATTACTTTTTTTTAGACAAAGAGAAGGGCCTTTTTATCCA
ACCCTAAGATTACTTCACAAATATCCTTTTATCCTGCCACATCAGCAGGTTGATAAAGGGGCCATCAAATTTTTACTCAG
TGGAGCAAATATCATATGTCCAGGCTTAACTTCTCCTGGAGCTAAACTTTACCCTGCTGTAGTAGATACAATTGTTGCCA
TCATGGCAGAAGGAAAACAGCATGCTTGTGTCGGAATCATGAAGATGTCTGCAGAAGACATTGAGAAAGTCAACAAAAGA
ATTGGCATTGAAGATATCCATTATTTAAATGATGGGCTGTGGCATATGAAGACATATAAATGA
ATGGGCGAAGGAAGATTTGATGAAAAAGAAAATGTGTCCAACTGCATCCAGTTGAAAACCTCAGTGATAAAGGGTATTAA
GAACCAATTAATAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGTTCCCGTCAAAATAG
TGCGATGCCATGAACATATAGAAATCCTTACAGTAAATGGATTACTTTTTTTTAGACAAAGAGAAGGGCCTTTTTATCCA
ACCCTAAGATTACTTCACAAATATCCTTTTATCCTGCCACATCAGCAGGTTGATAAAGGGGCCATCAAATTTTTACTCAG
TGGAGCAAATATCATATGTCCAGGCTTAACTTCTCCTGGAGCTAAACTTTACCCTGCTGTAGTAGATACAATTGTTGCCA
TCATGGCAGAAGGAAAACAGCATGCTTGTGTCGGAATCATGAAGATGTCTGCAGAAGACATTGAGAAAGTCAACAAAAGA
ATTGGCATTGAAGATATCCATTATTTAAATGATGGGCTGTGGCATATGAAGACATATAAATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005502 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000007258 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015462 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000232119 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009420 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015101 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010354 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000000355 | possible_ortholog | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014315 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022241 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002563 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011496 | possible_ortholog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010666 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000001440 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007208 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_645 | 77.25 | 91.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_867 | 92.70 | 97.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pvam_1323 | 77.84 | 91.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000013249 retrocopies