Parental gene: | HNRNPA3, ENSPVAG00000010380 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_2973:82919..88177(+) |
>ENSPVAG00000010380
ATGGAGGTAAAACCGCCGCCCGGTCGCCCCCAGCCCGACTCCGGCCGTCGCCGCCGCCGCCGGGGGGAGGAGGGCCATGA
TCCGAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGTCTGAGCTTTGAAACTACAGATGATAGTTTAAGAGAAC
ATTTTGAAAAATGGGGTACACTCACAGATTGTGTGGTGATGAGAGACCCCCAAACAAAACGTTCCAGGGGGTTTGGTTTT
GTGACATACTCTTGTGTTGAAGAGGTGGATGCAGCAATGTGTGCTCGACCACACAAGGTTGATGGGCGTGTAGTGGAACC
AAAGAGAGCTGTGTCTAGAGAGGATTCGGTAAAGCCTGGAGCCCATCTAACAGTGAAGAAAATTTTCGTTGGTGGTATTA
AAGAAGATACAGAAGAATATAATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATGGAAGAC
AGGCAGAGTGGAAAAAAAAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGATAAAATTGTTGTTCAGAA
ATACCACACTATTAATGGGCATAATTGTGAAGTGAAAAAAGCCCTTTCTAAACAAGAAATGCAGTCTGCTGGATCACAAA
GAGGTCGTGGTGGTGGATCTGGCAACTTTATGGGTCGTGGAGGAAACTTTGGAGGTGGTGGGGGTAACTTTGGCCGTGGT
GGAAACTTTGGTGGAAGAGGAGGCTATGGTGGTGGAGGTGGCAGCAGAGGTAGTTATGGAGGAGGTGATGGTGGATATAA
TGGATTTGGAGGTGATGGTGGCAACTATGGCGGTGGTCCTGGTTATAGTAGTAGAGGAGGCTATGGTGGTGGTGGTGGTG
GAGGACCAGGAGGATATGGAAACCAAGGTGGTGGATATGGTGGTGGAGGATATGATGGTTACAATGAAGGGGGAAATTTT
GGCGGTAACTATGGTGGTGGTGGGAACTATAATGATTTTGGAAATTACAGTGGACAACAGCAATCAAATTACGGACCCAT
GAAGGGAGGGGGCAGTTTTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGGTGGTTATGGATCTGGTGGTGGAAGTGGTG
GATATGGTAGCAGAAGGTTCTAA
ATGGAGGTAAAACCGCCGCCCGGTCGCCCCCAGCCCGACTCCGGCCGTCGCCGCCGCCGCCGGGGGGAGGAGGGCCATGA
TCCGAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGTCTGAGCTTTGAAACTACAGATGATAGTTTAAGAGAAC
ATTTTGAAAAATGGGGTACACTCACAGATTGTGTGGTGATGAGAGACCCCCAAACAAAACGTTCCAGGGGGTTTGGTTTT
GTGACATACTCTTGTGTTGAAGAGGTGGATGCAGCAATGTGTGCTCGACCACACAAGGTTGATGGGCGTGTAGTGGAACC
AAAGAGAGCTGTGTCTAGAGAGGATTCGGTAAAGCCTGGAGCCCATCTAACAGTGAAGAAAATTTTCGTTGGTGGTATTA
AAGAAGATACAGAAGAATATAATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATGGAAGAC
AGGCAGAGTGGAAAAAAAAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGATAAAATTGTTGTTCAGAA
ATACCACACTATTAATGGGCATAATTGTGAAGTGAAAAAAGCCCTTTCTAAACAAGAAATGCAGTCTGCTGGATCACAAA
GAGGTCGTGGTGGTGGATCTGGCAACTTTATGGGTCGTGGAGGAAACTTTGGAGGTGGTGGGGGTAACTTTGGCCGTGGT
GGAAACTTTGGTGGAAGAGGAGGCTATGGTGGTGGAGGTGGCAGCAGAGGTAGTTATGGAGGAGGTGATGGTGGATATAA
TGGATTTGGAGGTGATGGTGGCAACTATGGCGGTGGTCCTGGTTATAGTAGTAGAGGAGGCTATGGTGGTGGTGGTGGTG
GAGGACCAGGAGGATATGGAAACCAAGGTGGTGGATATGGTGGTGGAGGATATGATGGTTACAATGAAGGGGGAAATTTT
GGCGGTAACTATGGTGGTGGTGGGAACTATAATGATTTTGGAAATTACAGTGGACAACAGCAATCAAATTACGGACCCAT
GAAGGGAGGGGGCAGTTTTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGGTGGTTATGGATCTGGTGGTGGAAGTGGTG
GATATGGTAGCAGAAGGTTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013497 | ortholog_one2one | 12 retrogenes | |
| Ficedula albicollis | ENSFALG00000003215 | ortholog_one2one | 1 retrogene | |
| Gallus gallus | ENSGALG00000009250 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013622 | ortholog_one2one | 6 retrogenes | |
| Mus musculus | ENSMUSG00000059005 | possible_ortholog | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002743 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028132 | ortholog_one2one | 7 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000003011 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000000322 | within_species_paralog | 9 retrogenes | |
| Sus scrofa | ENSSSCG00000015988 | ortholog_one2one | 6 retrogenes | |
| Xenopus tropicalis | ENSXETG00000001806 | ortholog_one2one | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000000439 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_326 | 71.43 | 72.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_1077 | 58.25 | 53.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000010380 retrocopies