Parental gene:

HNRNPA3, ENSMEUG00000013622

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941]
Organism:Wallaby (Macropus eugenii)
Coordinates:Scaffold43672:1633..7600(-)


>ENSMEUG00000013622
ATGGAGGTAAAACAGCCGCCCGGCCGCCCCCAGCCCGACTCCGGCCGCCGTCGCCGTCGCCGGGGGGAGGAGGGTCATGA
TCCAAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGCTTGAGCTTTGAAACTACGGATGATAGTTTAAGAGAAC
ACTTTGAAAAATGGGGCACTCTCACAGATTGTGTGGTGATGAGAGATCCCCAAACAAAACGTTCCAGAGGCTTTGGCTTT
GTGACTTACTCTTGTGTAGAAGAGGTAGATGCAGCAATGTGTGCTCGGCCACATAAGGTTGATGGGCGTGTAGTGGAACC
AAAGAGAGCTGTTTCTAGAGAGGACTCTGTAAAACCTGGTGCACATCTAACCGTGAAGAAAATTTTTGTTGGTGGTATTA
AAGAAGATACAGAAGAATATAATTTAAGAGACTACTTTGAAAAGTATGGCAAAATCGAAACTATAGAAGTTATGGAAGAT
CGACAGAGTGGAAAGAAGAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGACAAAATTGTTGTTCAGAA
ATATCATACTATTAATGGGCATAACTGTGAAGTGAAAAAGGCCCTTTCGAAGCAAGAGATGCAGTCTGCTGGCTCGCAAA
GAGGTCGTGGAGGTGGCTCAGGCAATTTTATGGGTCGAGGAGGAAACTTTGGAGGTGGTGGAGGAAACTTTGGCCGTGGA
GGAAACTTTGGAGGAAGAGGTGGTTATGGTGGTGGTGGTGGTGGCAGCAGAGGCAGTTATGGAGGTGGAGATGGTGGATA
TAATGGATTTGGTGGTGATGGTGGCAACTATGGAGGTGGTCCTGGCTACAGTAGTAGAGGGGGTTATGGTGGTGGTGGTG
GACCTGGATATGGAAACCAAGGTGGTGGATATGGTGGTGGTGGAGGAGGATATGATGGTTACAATGAAGGAGGAAATTTT
GGTGGTGGTAACTATGGTGGCAGTGGGAACTATAATGATTTTGGAAATTATAGTGGGCAGCAGCAGTCAAATTATGGACC
CATGAAAGGAGGCAGTTTTGGTGGAAGGAGCTCAGGCAGTTATGGTGGTGGTTATGGATCTGGTGGTGGAAGTGGTGGAT
ATGGTAGCAGAAGGTTCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021580 ortholog_one2one 8 retrogenes
retro_btau_1029, retro_btau_1310, retro_btau_1587, retro_btau_212, retro_btau_277, retro_btau_370, retro_btau_811, retro_btau_90,
Canis familiaris ENSCAFG00000013497 ortholog_one2one 12 retrogenes
retro_cfam_1214, retro_cfam_1326, retro_cfam_1388, retro_cfam_1548, retro_cfam_1690, retro_cfam_1816, retro_cfam_265, retro_cfam_272, retro_cfam_400, retro_cfam_625, retro_cfam_65, retro_cfam_836,
Dasypus novemcinctus ENSDNOG00000019022 ortholog_one2one 3 retrogenes
retro_dnov_540, retro_dnov_711, retro_dnov_959,
Ficedula albicollis ENSFALG00000003215 ortholog_one2one 1 retrogene
retro_falb_15,
Felis catus ENSFCAG00000012146 ortholog_one2one 5 retrogenes
retro_fcat_1231, retro_fcat_572, retro_fcat_662, retro_fcat_677, retro_fcat_842,
Homo sapiens ENSG00000170144 ortholog_one2one 11 retrogenes
retro_hsap_1117, retro_hsap_1274, retro_hsap_1572, retro_hsap_209, retro_hsap_2194, retro_hsap_2664, retro_hsap_2951, retro_hsap_34, retro_hsap_4764, retro_hsap_665, retro_hsap_862,
Gallus gallus ENSGALG00000009250 ortholog_one2one 1 retrogene
retro_ggal_10,
Gorilla gorilla ENSGGOG00000006130 ortholog_one2one 6 retrogenes
retro_ggor_1001, retro_ggor_1197, retro_ggor_14, retro_ggor_1736, retro_ggor_576, retro_ggor_702,
Macropus eugenii ENSMEUG00000001084 other_paralog 2 retrogenes
retro_meug_1897, retro_meug_214,
Macropus eugenii ENSMEUG00000007909 other_paralog 2 retrogenes
retro_meug_169, retro_meug_246,
Macropus eugenii ENSMEUG00000011454 other_paralog 7 retrogenes
retro_meug_1252, retro_meug_1378, retro_meug_1491, retro_meug_1971, retro_meug_2165, retro_meug_249, retro_meug_766,
Macaca mulatta ENSMMUG00000001858 ortholog_one2one 4 retrogenes
retro_mmul_1945, retro_mmul_2442, retro_mmul_386, retro_mmul_801,
Mus musculus ENSMUSG00000059005 ortholog_one2many 6 retrogenes
retro_mmus_133, retro_mmus_1359, retro_mmus_1409, retro_mmus_210, retro_mmus_3635, retro_mmus_60,
Oryctolagus cuniculus ENSOCUG00000002743 possible_ortholog 2 retrogenes
retro_ocun_994, retro_ocun_995,
Otolemur garnettii ENSOGAG00000028132 ortholog_one2one 7 retrogenes
retro_ogar_1869, retro_ogar_1924, retro_ogar_2222, retro_ogar_2590, retro_ogar_3215, retro_ogar_600, retro_ogar_814,
Pelodiscus sinensis ENSPSIG00000003011 ortholog_one2one 1 retrogene
retro_psin_16,
Pteropus vampyrus ENSPVAG00000010380 ortholog_one2one 2 retrogenes
retro_pvam_1077, retro_pvam_326,
Sus scrofa ENSSSCG00000015988 ortholog_one2one 6 retrogenes
retro_sscr_1110, retro_sscr_1152, retro_sscr_391, retro_sscr_621, retro_sscr_764, retro_sscr_927,
Ictidomys tridecemlineatus ENSSTOG00000025125 ortholog_one2one 4 retrogenes
retro_itri_1444, retro_itri_1878, retro_itri_952, retro_itri_98,
Xenopus tropicalis ENSXETG00000001806 ortholog_one2one 1 retrogene
retro_xtro_11,
Xiphophorus maculatus ENSXMAG00000000439 ortholog_one2one 1 retrogene
retro_xmac_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_56 53.28 63.32
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2. retro_meug_238 77.38 58.05
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3. retro_meug_470 70.04 67.55
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4. retro_meug_1264 64.41 57.26
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5. retro_meug_1760 75.74 80.21
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6. retro_meug_1913 70.34 61.48
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Download FASTA sequences of all ENSMEUG00000013622 retrocopies