Parental gene:

HNRNPD, ENSSHAG00000013312

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) [Source:HGNC Symbol;Acc:5036]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL864752.1:1211218..1227921(-)


>ENSSHAG00000013312
CATTCAAACTCCTCCCCACGGCACTCTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAG
CTGGGACACTACAAAGAAAGATCTGAAGGACTACTTTTCCAAATTTGGTGAAGTTGTAGACTGCACTCTGAAGTTAGATC
CAATCACAGGGCGATCAAGGGGTTTTGGCTTTGTACTATTTAAAGAATCGGAGAGTGTAGATAAGGTCATGGACCAGAAA
GAACACAAATTGAATGGCAAAGTGATTGATCCTAAAAGGGCCAAAGCCATGAAAACAAAAGAACCTGTTAAAAAAATTTT
TGTTGGTGGCCTTTCTCCAGATACACCTGAAGAGAAAATAAGGGAGTACTTTGGTGGTTTTGGTGAGGTGGAATCTATAG
AGCTCCCCATGGACAACAAGACCAACAAGAGGCGTGGATTCTGCTTTATTACTTTTAAGGAAGAAGAACCAGTGAAGAAA
ATAATGGAAAAGAAATATCACAACGTTGGTCTTAGTAAATGTGAAATAAAAGTAGCCATGTCAAAGGAGCAATATCAACA
GCAGCAGCAGTGGGGATCCAGAGGAGGATTTGCAGGAAGAGCTCGTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACC
AGGGATATAGTAACTATTGGAATCAAGGCTATGGCAACTATGGATATAACAGCCAAGGTTACGGTGGTTATGGAGGATAT
GACTACACTGGTTACAACAACTACTATGGATATGGTGATTATAGCAACCAGCAGAGTGGTTATGGGAAAGTGTCCAGGCG
AGGCGGTCATCAAAATAGCTACAAACCATACTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015165 ortholog_one2many 1 retrogene
retro_cjac_2796,
Dipodomys ordii ENSDORG00000012507 ortholog_one2one 1 retrogene
retro_dord_649,
Homo sapiens ENSG00000138668 ortholog_one2one 1 retrogene
retro_hsap_4689,
Gorilla gorilla ENSGGOG00000026760 ortholog_one2one 1 retrogene
retro_ggor_2916,
Loxodonta africana ENSLAFG00000016483 ortholog_one2one 1 retrogene
retro_lafr_686,
Pan troglodytes ENSPTRG00000016215 ortholog_one2one 1 retrogene
retro_ptro_3116,
Sarcophilus harrisii ENSSHAG00000013616 within_species_paralog 3 retrogenes
retro_shar_297, retro_shar_527, retro_shar_625,
Sarcophilus harrisii ENSSHAG00000018255 other_paralog 1 retrogene
retro_shar_518,
Tupaia belangeri ENSTBEG00000002327 ortholog_one2one 1 retrogene
retro_tbel_2698,
Tarsius syrichta ENSTSYG00000010395 ortholog_one2one 3 retrogenes
retro_tsyr_1092, retro_tsyr_2070, retro_tsyr_269,
Tursiops truncatus ENSTTRG00000007592 ortholog_one2one 1 retrogene
retro_ttru_1913,
Vicugna pacos ENSVPAG00000004374 ortholog_one2one 2 retrogenes
retro_vpac_484, retro_vpac_97,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_752 57.62 52.71
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Download FASTA sequences of all ENSSHAG00000013312 retrocopies