Parental gene:

HNRNPD, ENSG00000138668

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) [Source:HGNC Symbol;Acc:5036]
Organism:Human (Homo sapiens)
Coordinates:4:83273650..83295656(-)


>ENSG00000138668
ATGTCGGAGGAGCAGTTCGGCGGGGACGGGGCGGCGGCAGCGGCAACGGCGGCGGTAGGCGGCTCGGCGGGCGAGCAGGA
GGGAGCCATGGTGGCGGCGACACAGGGGGCAGCGGCGGCGGCGGGAAGCGGAGCCGGGACCGGGGGCGGAACCGCGTCTG
GAGGCACCGAAGGGGGCAGCGCCGAGTCGGAGGGGGCGAAGATTGACGCCAGTAAGAACGAGGAGGATGAAGGCCATTCA
AACTCCTCCCCACGACACTCTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAGCTGGGA
CACTACAAAGAAAGATCTGAAGGACTACTTTTCCAAATTTGGTGAAGTTGTAGACTGCACTCTGAAGTTAGATCCTATCA
CAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAATCGGAGAGTGTAGATAAGGTCATGGATCAAAAAGAACAT
AAATTGAATGGGAAGGTGATTGATCCTAAAAGGGCCAAAGCCATGAAAACAAAAGAGCCGGTTAAAAAAATTTTTGTTGG
TGGCCTTTCTCCAGATACACCTGAAGAGAAAATAAGGGAGTACTTTGGTGGTTTTGGTGAGGTGGAATCCATAGAGCTCC
CCATGGACAACAAGACCAATAAGAGGCGTGGGTTCTGCTTTATTACCTTTAAGGAAGAAGAACCAGTGAAGAAGATAATG
GAAAAGAAATACCACAATGTTGGTCTTAGTAAATGTGAAATAAAAGTAGCCATGTCGAAGGAACAATATCAGCAACAGCA
ACAGTGGGGATCTAGAGGAGGATTTGCAGGAAGAGCTCGTGGAAGAGGTGGTGGCCCCAGTCAAAACTGGAACCAGGGAT
ATAGTAACTATTGGAATCAAGGCTATGGCAACTATGGATATAACAGCCAAGGTTACGGTGGTTATGGAGGATATGACTAC
ACTGGTTACAACAACTACTATGGATATGGTGATTATAGCAACCAGCAGAGTGGTTATGGGAAGGTATCCAGGCGAGGTGG
TCATCAAAATAGCTACAAACCATACTAA

Library Parental gene expression (RPM)
bodymap2_adipose 295 .94 RPM
bodymap2_adrenal 313 .28 RPM
bodymap2_brain 190 .17 RPM
bodymap2_breast 188 .45 RPM
bodymap2_colon 224 .74 RPM
bodymap2_heart 78 .39 RPM
bodymap2_kidney 162 .57 RPM
bodymap2_liver 78 .60 RPM
bodymap2_lung 178 .85 RPM
bodymap2_lymph_node 181 .90 RPM
bodymap2_ovary 407 .61 RPM
bodymap2_prostate 241 .74 RPM
bodymap2_skeletal_muscle 93 .47 RPM
bodymap2_testis 241 .87 RPM
bodymap2_thyroid 261 .30 RPM
bodymap2_white_blood_cells 220 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015165 ortholog_one2many 1 retrogene
retro_cjac_2796,
Dipodomys ordii ENSDORG00000012507 ortholog_one2one 1 retrogene
retro_dord_649,
Homo sapiens ENSG00000135486 other_paralog 57 retrogenes
retro_hsap_1021, retro_hsap_1042, retro_hsap_1082, retro_hsap_1240, retro_hsap_1276, retro_hsap_1282, retro_hsap_1287, retro_hsap_1481, retro_hsap_158, retro_hsap_1584, retro_hsap_1613, retro_hsap_1638, retro_hsap_1711, retro_hsap_1899, retro_hsap_1933, retro_hsap_2002, retro_hsap_2029, retro_hsap_2091, retro_hsap_2096, retro_hsap_2197, retro_hsap_2347, retro_hsap_2379, retro_hsap_2636, retro_hsap_2640, retro_hsap_2668, retro_hsap_2718, retro_hsap_2857, retro_hsap_291, retro_hsap_2917, retro_hsap_2944, retro_hsap_3049, retro_hsap_3055, retro_hsap_332, retro_hsap_3343, retro_hsap_3393, retro_hsap_3432, retro_hsap_3439, retro_hsap_3449, retro_hsap_3549, retro_hsap_3745, retro_hsap_3756, retro_hsap_3757, retro_hsap_394, retro_hsap_3979, retro_hsap_4011, retro_hsap_4084, retro_hsap_414, retro_hsap_4218, retro_hsap_4282, retro_hsap_437, retro_hsap_4747, retro_hsap_482, retro_hsap_4883, retro_hsap_668, retro_hsap_84, retro_hsap_845, retro_hsap_924,
Homo sapiens ENSG00000170144 other_paralog 11 retrogenes
retro_hsap_1117, retro_hsap_1274, retro_hsap_1572, retro_hsap_209, retro_hsap_2194, retro_hsap_2664, retro_hsap_2951, retro_hsap_34, retro_hsap_4764, retro_hsap_665, retro_hsap_862,
Homo sapiens ENSG00000197451 within_species_paralog 1 retrogene
retro_hsap_962,
Gorilla gorilla ENSGGOG00000026760 ortholog_one2one 1 retrogene
retro_ggor_2916,
Loxodonta africana ENSLAFG00000016483 ortholog_one2one 1 retrogene
retro_lafr_686,
Pan troglodytes ENSPTRG00000016215 ortholog_one2one 1 retrogene
retro_ptro_3116,
Sarcophilus harrisii ENSSHAG00000013312 ortholog_one2one 1 retrogene
retro_shar_752,
Tarsius syrichta ENSTSYG00000010395 ortholog_one2one 3 retrogenes
retro_tsyr_1092, retro_tsyr_2070, retro_tsyr_269,
Tursiops truncatus ENSTTRG00000007592 ortholog_one2one 1 retrogene
retro_ttru_1913,
Vicugna pacos ENSVPAG00000004374 ortholog_one2one 2 retrogenes
retro_vpac_484, retro_vpac_97,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4689 85.51 61.61
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000138668 retrocopies