Parental gene:

RPL36, ENSSSCG00000030010

Aliases:None
Description:ribosomal protein L36 [Source:HGNC Symbol;Acc:13631]
Organism:Pig (Sus scrofa)
Coordinates:2:73808881..73810492(-)


>ENSSSCG00000030010
ATGGCTCTGCGCTACCCCATGGCTGTGGGCCTCAACAAGGGCCATAAAGTGACCAAGAACGTGAGCAAGCCGAGGCACAG
CCGCCGCCGCGGGCGCCTCACCAAGCACACCAAGTTTGTACGGGACATGATCCGGGAGGTGTGCGGCTTTGCGCCTTATG
AGCGGCGGGCCATGGAGCTGCTCAAGGTCTCCAAAGACAAGCGGGCCCTCAAGTTCATCAAGAAAAGGGTGGGGACACAT
ATCCGTGCCAAGAGGAAGAGAGAGGAGCTGAGCAATGTTCTAGCGGCCATGAGGAAAGCAGCAGCCAAGAAGGACTGA

Library Parental gene expression (RPM)
SRP014902_placenta 193 .12 RPM
SRP014902_testis 515 .29 RPM
SRP018288_heart 164 .23 RPM
SRP018288_kidney 193 .27 RPM
SRP018288_liver 179 .42 RPM
SRP018288_lung 352 .62 RPM
SRP018856_adipose 288 .10 RPM
SRP035408_brain 198 .53 RPM
SRP035408_liver 186 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012349 ortholog_one2one 6 retrogenes
retro_amel_1222, retro_amel_1581, retro_amel_1935, retro_amel_748, retro_amel_799, retro_amel_835,
Bos taurus ENSBTAG00000001794 possible_ortholog 3 retrogenes
retro_btau_139, retro_btau_238, retro_btau_81,
Callithrix jacchus ENSCJAG00000017072 possible_ortholog 2 retrogenes
retro_cjac_280, retro_cjac_52,
Cavia porcellus ENSCPOG00000022839 ortholog_one2one 3 retrogenes
retro_cpor_1317, retro_cpor_1343, retro_cpor_857,
Dasypus novemcinctus ENSDNOG00000005163 ortholog_one2one 8 retrogenes
retro_dnov_19, retro_dnov_2160, retro_dnov_311, retro_dnov_313, retro_dnov_457, retro_dnov_578, retro_dnov_595, retro_dnov_631,
Felis catus ENSFCAG00000011838 ortholog_one2one 5 retrogenes
retro_fcat_1152, retro_fcat_1168, retro_fcat_1216, retro_fcat_406, retro_fcat_94,
Homo sapiens ENSG00000130255 ortholog_one2one 13 retrogenes
retro_hsap_1059, retro_hsap_1440, retro_hsap_2000, retro_hsap_2434, retro_hsap_2577, retro_hsap_3051, retro_hsap_3248, retro_hsap_3769, retro_hsap_3892, retro_hsap_396, retro_hsap_4211, retro_hsap_4742, retro_hsap_534,
Gorilla gorilla ENSGGOG00000015365 possible_ortholog 11 retrogenes
retro_ggor_1514, retro_ggor_1613, retro_ggor_180, retro_ggor_2211, retro_ggor_2535, retro_ggor_2620, retro_ggor_34, retro_ggor_487, retro_ggor_60, retro_ggor_82, retro_ggor_885,
Latimeria chalumnae ENSLACG00000015161 ortholog_one2one 1 retrogene
retro_lcha_47,
Macropus eugenii ENSMEUG00000002743 ortholog_one2many 4 retrogenes
retro_meug_1318, retro_meug_176, retro_meug_261, retro_meug_283,
Monodelphis domestica ENSMODG00000001275 ortholog_one2many 2 retrogenes
retro_mdom_1353, retro_mdom_148,
Mustela putorius furo ENSMPUG00000006166 ortholog_one2one 6 retrogenes
retro_mputfur_1423, retro_mputfur_150, retro_mputfur_1562, retro_mputfur_747, retro_mputfur_749, retro_mputfur_773,
Mus musculus ENSMUSG00000057863 ortholog_one2many 9 retrogenes
retro_mmus_151, retro_mmus_1601, retro_mmus_1900, retro_mmus_1912, retro_mmus_193, retro_mmus_2864, retro_mmus_3379, retro_mmus_38, retro_mmus_652,
Otolemur garnettii ENSOGAG00000027049 ortholog_one2many 12 retrogenes
retro_ogar_1348, retro_ogar_18, retro_ogar_184, retro_ogar_2256, retro_ogar_2278, retro_ogar_2332, retro_ogar_2537, retro_ogar_2592, retro_ogar_3278, retro_ogar_358, retro_ogar_795, retro_ogar_888,
Pongo abelii ENSPPYG00000009431 ortholog_one2one 12 retrogenes
retro_pabe_1194, retro_pabe_137, retro_pabe_1639, retro_pabe_1792, retro_pabe_1834, retro_pabe_1898, retro_pabe_216, retro_pabe_3081, retro_pabe_3173, retro_pabe_318, retro_pabe_3443, retro_pabe_3688,
Rattus norvegicus ENSRNOG00000033473 ortholog_one2many 5 retrogenes
retro_rnor_11, retro_rnor_17, retro_rnor_170, retro_rnor_369, retro_rnor_687,
Sarcophilus harrisii ENSSHAG00000013492 ortholog_one2one 8 retrogenes
retro_shar_185, retro_shar_347, retro_shar_543, retro_shar_557, retro_shar_592, retro_shar_615, retro_shar_716, retro_shar_819,
Ictidomys tridecemlineatus ENSSTOG00000020518 ortholog_one2many 2 retrogenes
retro_itri_43, retro_itri_593,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_849 65.74 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_sscr_960 56.10 77.14
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000030010 retrocopies