RetrogeneDB - Parental gene ENSMUSG00000057863 details

                            
>ENSMUSG00000057863
ATGGCTCTGCGCTACCCCATGGCCGTGGGCCTCAACAAGGGCCACAAGGTGACGAAAAACGTCAGTAAGCCGAGACACAG

CCGGCGACGCGGGCGCCTCACCAAACACACCAAGTTCGTGCGGGACATGATCCGGGAGGTGTGCGGCTTCGCACCCTACG

AGCGGCGAGCCATGGAGTTGCTCAAAGTGTCCAAGGACAAGCGCGCACTCAAGTTCATCAAGAAGAGGGTGGGCACGCAC

ATCCGCGCCAAGAGAAAGCGGGAGGAGCTGAGCAACGTGCTGGCAGCCATGAGGAAGGCGGCGGCCAAGAAGGATTGA

Library	Parental gene expression (RPM)
SRP007412_brain	14 .25 RPM
SRP007412_cerebellum	9 .60 RPM
SRP007412_heart	36 .86 RPM
SRP007412_kidney	17 .61 RPM
SRP007412_liver	23 .57 RPM
SRP007412_testis	33 .76 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000012349	ortholog_one2many	6 retrogenes	retro_amel_1222, retro_amel_1581, retro_amel_1935, retro_amel_748, retro_amel_799, retro_amel_835,
Bos taurus	ENSBTAG00000001794	possible_ortholog	3 retrogenes	retro_btau_139, retro_btau_238, retro_btau_81,
Callithrix jacchus	ENSCJAG00000017072	possible_ortholog	2 retrogenes	retro_cjac_280, retro_cjac_52,
Cavia porcellus	ENSCPOG00000022839	ortholog_one2one	3 retrogenes	retro_cpor_1317, retro_cpor_1343, retro_cpor_857,
Dasypus novemcinctus	ENSDNOG00000005163	ortholog_one2many	8 retrogenes	retro_dnov_19, retro_dnov_2160, retro_dnov_311, retro_dnov_313, retro_dnov_457, retro_dnov_578, retro_dnov_595, retro_dnov_631,
Echinops telfairi	ENSETEG00000012943	possible_ortholog	15 retrogenes	retro_etel_1168, retro_etel_1199, retro_etel_1315, retro_etel_1336, retro_etel_139, retro_etel_1396, retro_etel_1425, retro_etel_1432, retro_etel_1528, retro_etel_2168, retro_etel_342, retro_etel_575, retro_etel_78, retro_etel_908, retro_etel_922,
Felis catus	ENSFCAG00000011838	ortholog_one2many	5 retrogenes	retro_fcat_1152, retro_fcat_1168, retro_fcat_1216, retro_fcat_406, retro_fcat_94,
Homo sapiens	ENSG00000130255	possible_ortholog	13 retrogenes	retro_hsap_1059, retro_hsap_1440, retro_hsap_2000, retro_hsap_2434, retro_hsap_2577, retro_hsap_3051, retro_hsap_3248, retro_hsap_3769, retro_hsap_3892, retro_hsap_396, retro_hsap_4211, retro_hsap_4742, retro_hsap_534,
Gorilla gorilla	ENSGGOG00000015365	possible_ortholog	11 retrogenes	retro_ggor_1514, retro_ggor_1613, retro_ggor_180, retro_ggor_2211, retro_ggor_2535, retro_ggor_2620, retro_ggor_34, retro_ggor_487, retro_ggor_60, retro_ggor_82, retro_ggor_885,
Latimeria chalumnae	ENSLACG00000015161	ortholog_one2many	1 retrogene	retro_lcha_47,
Macropus eugenii	ENSMEUG00000002743	ortholog_many2many	4 retrogenes	retro_meug_1318, retro_meug_176, retro_meug_261, retro_meug_283,
Monodelphis domestica	ENSMODG00000001275	ortholog_many2many	2 retrogenes	retro_mdom_1353, retro_mdom_148,
Mustela putorius furo	ENSMPUG00000006166	ortholog_one2many	6 retrogenes	retro_mputfur_1423, retro_mputfur_150, retro_mputfur_1562, retro_mputfur_747, retro_mputfur_749, retro_mputfur_773,
Nomascus leucogenys	ENSNLEG00000013689	possible_ortholog	15 retrogenes	retro_nleu_1132, retro_nleu_1244, retro_nleu_1415, retro_nleu_1645, retro_nleu_1699, retro_nleu_1788, retro_nleu_183, retro_nleu_1899, retro_nleu_2032, retro_nleu_2123, retro_nleu_242, retro_nleu_2451, retro_nleu_2503, retro_nleu_2835, retro_nleu_757,
Otolemur garnettii	ENSOGAG00000027049	ortholog_one2one	12 retrogenes	retro_ogar_1348, retro_ogar_18, retro_ogar_184, retro_ogar_2256, retro_ogar_2278, retro_ogar_2332, retro_ogar_2537, retro_ogar_2592, retro_ogar_3278, retro_ogar_358, retro_ogar_795, retro_ogar_888,
Pongo abelii	ENSPPYG00000009431	ortholog_one2many	12 retrogenes	retro_pabe_1194, retro_pabe_137, retro_pabe_1639, retro_pabe_1792, retro_pabe_1834, retro_pabe_1898, retro_pabe_216, retro_pabe_3081, retro_pabe_3173, retro_pabe_318, retro_pabe_3443, retro_pabe_3688,
Pan troglodytes	ENSPTRG00000010338	possible_ortholog	13 retrogenes	retro_ptro_1334, retro_ptro_1406, retro_ptro_1430, retro_ptro_1506, retro_ptro_1989, retro_ptro_2196, retro_ptro_2555, retro_ptro_2647, retro_ptro_2858, retro_ptro_3157, retro_ptro_399, retro_ptro_721, retro_ptro_982,
Rattus norvegicus	ENSRNOG00000033473	possible_ortholog	5 retrogenes	retro_rnor_11, retro_rnor_17, retro_rnor_170, retro_rnor_369, retro_rnor_687,
Sarcophilus harrisii	ENSSHAG00000013492	ortholog_one2many	8 retrogenes	retro_shar_185, retro_shar_347, retro_shar_543, retro_shar_557, retro_shar_592, retro_shar_615, retro_shar_716, retro_shar_819,
Sus scrofa	ENSSSCG00000030010	ortholog_one2many	2 retrogenes	retro_sscr_849, retro_sscr_960,
Ictidomys tridecemlineatus	ENSSTOG00000020518	possible_ortholog	2 retrogenes	retro_itri_43, retro_itri_593,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_mmus_38	98.10	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_mmus_151	93.20	98.10	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_mmus_193	98.06	98.10	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_mmus_652	83.96	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_mmus_1601	96.19	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_mmus_1900	98.10	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_mmus_1912	78.30	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_mmus_2864	99.05	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_mmus_3379	78.41	82.86	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSMUSG00000057863 retrocopies

Parental gene:	Rpl36, ENSMUSG00000057863
Aliases:	None
Description:	ribosomal protein L36 [Source:MGI Symbol;Acc:MGI:1860603]
Organism:	*Mouse (Mus musculus)*
Coordinates:	17:56613394..56614243(+)

Parental gene:

Rpl36, ENSMUSG00000057863