RetrogeneDB ID: | retro_itri_593 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393304.1:6125919..6126213(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000020518 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.05 % |
Parental protein coverage: | 95.24 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MALRYPM-AVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFA-PYERRAMELLKVSKDKR |
MA..YPM.AVGLNKGH.VTKNVS.PRHS...G..TK.TK...DMI..VCGF....E...MELLKVSKDK. | |
Retrocopy | MAVCYPM<AVGLNKGHRVTKNVSTPRHSHHSGCFTKYTKLMQDMIQKVCGFS<SDEHHTMELLKVSKDKG |
Parental | ALKFIKKRV-GTHIRAKRKREELSNVLAAMRKA |
A.KFIKKRV..THI..K.KREE...VL...RKA | |
Retrocopy | APKFIKKRV<ETHIYTKLKREE-HHVLDIVRKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |