Parental gene:

ENSSTOG00000015416

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393295.1:2168242..2190402(+)


>ENSSTOG00000015416
ATGGCCGCGGTTCCCGAGTTGCTGCAGCAGCAGGAGGAGGACCGTAACAAGCTGAGGTCTGTGTCTGTGGACCTGAATGT
TGATCCCTCACTTCAGATTGACATACCTGATGCACTCAGTGAGAGAGATAAGGTCAAGTTTACAGTGCACACCAAGACTA
CACTGCCCACTTTTCAGAGCTCAGAGTTTTCTGTTACAAGGCAACATGAAGACTTCGTGTGGCTACATGATACACTTATT
GAAACCACAGACTATGCTGGGCTTATTATTCCCCCTGCTCCTACAAAACCAGATTTCGATGGTCCTCGAGAAAAGATGCA
GAAACTGGGAGAGGGTGAAGGGTCTATGACCAAAGAAGAGTTTGCAAAGATGAAGCAAGAACTGGAAGCTGAATATCTCG
CTGTCTTTAAGAAGACTGTGTCCTCTCATGAAGTATTTCTTCAGCGGCTTTCTTCTCATCCTGTTCTCAGTAAAGATCGA
AACCTAAGTGTTAGGCGGAAAAATACCAAAGAAATGTTTGGTGGCTTCTTTAAAAGTGTGGTGAAAAGTGCTGATGAAGT
TCTTTTTTCTGGAGTTAAGGAGGTAGATGACTTCTTTGAGCAAGAGAAGAACTTCCTTATTAACTATTACAACAGGATCA
AGGATTCCTGTGCTAAAGCTGACAGAATGACCAGATCTCACAAAAATGTTGCTGATGACTATATTCACACTGCGGCCTCC
TTGCAGAGCCTGGCTTTAGAAGAACCCACAGTCATCAAAAAATACCTATTGAAGGTTGCTGAACTGTTTGAAAAACTTAG
GAAAGTGGAGGGTCGTGTTTCATCAGATGAAGATTTAAAGCTGACAGAGCTTCTTCGATACTACATGCTCAATATAGAGG
CTGCAAAGGATCTTTTATACAGACGCACCAAAGCCCTCATTGACTATGAGAACTCAAACAAAGCTCTGGATAAGGCCCGG
TTAAAAAGCAAAGATGTCAAGTTGGCTGAGGCACACCAACAGGAATGTTGCCAGAAATTTGAACAGCTTTCTGAATCTGC
AAAAGAAGAACTTATAAATTTCAAACGGAAGAGAGTGGCAGCGTTTAGAAAAAACCTAATTGAGATGTCTGAACTGGAAA
TAAAGCATGCCAGAAACAATGTCTCCCTCTTGCAGAGCTGCATTGACTTATTCAAGAACAACTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010128 ortholog_one2many 2 retrogenes
retro_chof_1478, retro_chof_2166,
Callithrix jacchus ENSCJAG00000004947 ortholog_one2many 2 retrogenes
retro_cjac_2192, retro_cjac_3243,
Homo sapiens ENSG00000089006 ortholog_one2many 2 retrogenes
retro_hsap_1051, retro_hsap_2945,
Gorilla gorilla ENSGGOG00000008953 ortholog_one2many 1 retrogene
retro_ggor_829,
Macropus eugenii ENSMEUG00000009110 ortholog_one2many 1 retrogene
retro_meug_475,
Macaca mulatta ENSMMUG00000011476 ortholog_one2many 2 retrogenes
retro_mmul_1746, retro_mmul_832,
Nomascus leucogenys ENSNLEG00000009714 ortholog_one2many 1 retrogene
retro_nleu_2071,
Oryctolagus cuniculus ENSOCUG00000017072 ortholog_one2many 1 retrogene
retro_ocun_1323,
Otolemur garnettii ENSOGAG00000006157 ortholog_many2many 1 retrogene
retro_ogar_1203,
Pongo abelii ENSPPYG00000010730 ortholog_one2many 2 retrogenes
retro_pabe_2442, retro_pabe_877,
Pan troglodytes ENSPTRG00000013278 ortholog_one2many 2 retrogenes
retro_ptro_2052, retro_ptro_717,
Sus scrofa ENSSSCG00000007088 ortholog_one2many 1 retrogene
retro_sscr_593,
Tursiops truncatus ENSTTRG00000016432 ortholog_one2many 1 retrogene
retro_ttru_410,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1176 95.04 61.42
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Download FASTA sequences of all ENSSTOG00000015416 retrocopies