Parental gene:

ENSSTOG00000019378

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393295.1:13774619..13777567(+)


>ENSSTOG00000019378
ATGATGCCGTCTCGTACTAATCTGGCTACTGGAATCCCCAGTAGTAAAGTAAAATACTCAAGGCTCTCCAGCACAGATGA
TGGCTACATTGACCTTCAGTTTAAGAAAAGCCCTCCTAAGATCCCTTATAAGGCCATTGCACTTGCCACTGTGCTGTTTT
TGATTGGCGCCTTTCTCATTATCATAGGCTCCCTCCTGCTGTCAGGCTACATTAGCAAAGGGGGGGCAGACCGGGCCGTT
CCTGTCCTGATTATTGGCATTCTGGTGTTCCTGCCAGGATTTTACCATCTGCGCATCGCCTACTATGCGTCTAAAGGCTA
CCGGGGTTACTCCTATGATGACATTCCAGACTTTGATGACTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009083 possible_ortholog 1 retrogene
retro_amel_1818,
Bos taurus ENSBTAG00000006063 possible_ortholog 2 retrogenes
retro_btau_1079, retro_btau_147,
Canis familiaris ENSCAFG00000006039 possible_ortholog 1 retrogene
retro_cfam_981,
Choloepus hoffmanni ENSCHOG00000010231 ortholog_one2many 12 retrogenes
retro_chof_1228, retro_chof_1463, retro_chof_1812, retro_chof_2199, retro_chof_2210, retro_chof_2400, retro_chof_253, retro_chof_2584, retro_chof_2661, retro_chof_397, retro_chof_884, retro_chof_996,
Callithrix jacchus ENSCJAG00000021275 ortholog_one2many 2 retrogenes
retro_cjac_3112, retro_cjac_4206,
Dasypus novemcinctus ENSDNOG00000005724 possible_ortholog 5 retrogenes
retro_dnov_1004, retro_dnov_2377, retro_dnov_2534, retro_dnov_373, retro_dnov_803,
Erinaceus europaeus ENSEEUG00000014992 ortholog_one2many 1 retrogene
retro_eeur_77,
Echinops telfairi ENSETEG00000018264 possible_ortholog 2 retrogenes
retro_etel_1604, retro_etel_665,
Homo sapiens ENSG00000089063 ortholog_one2many 3 retrogenes
retro_hsap_4890, retro_hsap_550, retro_hsap_783,
Loxodonta africana ENSLAFG00000006412 ortholog_one2many 1 retrogene
retro_lafr_1033,
Myotis lucifugus ENSMLUG00000023089 possible_ortholog 2 retrogenes
retro_mluc_1504, retro_mluc_1759,
Macaca mulatta ENSMMUG00000013258 ortholog_one2many 4 retrogenes
retro_mmul_1187, retro_mmul_2386, retro_mmul_2626, retro_mmul_856,
Nomascus leucogenys ENSNLEG00000007719 ortholog_one2many 3 retrogenes
retro_nleu_1256, retro_nleu_199, retro_nleu_723,
Otolemur garnettii ENSOGAG00000001386 ortholog_one2many 2 retrogenes
retro_ogar_1700, retro_ogar_3108,
Ochotona princeps ENSOPRG00000008611 possible_ortholog 1 retrogene
retro_opri_502,
Pongo abelii ENSPPYG00000010796 ortholog_one2many 3 retrogenes
retro_pabe_3801, retro_pabe_507, retro_pabe_916,
Pan troglodytes ENSPTRG00000013221 ortholog_one2many 4 retrogenes
retro_ptro_3030, retro_ptro_3257, retro_ptro_3258, retro_ptro_413,
Pteropus vampyrus ENSPVAG00000002863 possible_ortholog 1 retrogene
retro_pvam_44,
Vicugna pacos ENSVPAG00000007009 possible_ortholog 1 retrogene
retro_vpac_212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_35 100.00 100.00
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Download FASTA sequences of all ENSSTOG00000019378 retrocopies