Parental gene: | ENSSTOG00000020231 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393634.1:1118019..1136870(+) |
>ENSSTOG00000020231
ATGACAGATTACGGCGAGGAGCAACGCAATGAGCTGGAGGCTCTCGAGTCCATCTACCCCGATTCCTTCACAGTATTATC
GGAAAATCCACCCAGCTTCACCATTACTGTGACATCTGAGGCCGGAGAAAATGATGAAAGTAAGCTACTTTCTATTTTTC
TAAGAAGTGCTGAAGAAAATCTTGGTATGGTGATGATCTTTACTCTAGTGACAGCTGTGCAAGAAAAATTAAATGAAATA
GTAGATCAGATAAAAACTAGAAGAGAGGAAGAAAAGAAACAAAAAGAAAGAGAAGCAGAAGAAGCAGAAAAGCAACTATT
CCATGGCACTCCTGTTACAATAGAGAATTTCTTAAGTTGGAAGGCCAAGTTTGATGCAGAACTTTTGGAAATTAAAAAGA
AACGGATGAAAGAAGAAGAGCAAGCAGGAAAAAATAAATTGAGTGGGAAACAGCTATTTGAAACAGATCATAATCTTGAC
ACATCTGATATCCAGTTCTTGGAGGATGCTGGAAACAATGTGGAGGTAGATGAGTCTTTGTTCCAGGAAATGGATGACTT
AGAGCTGGAGGATGATGAAGATGACCCAGACTACAATCCTGCTGACCCAGGGAGTGACTCAGCAGACTGA
ATGACAGATTACGGCGAGGAGCAACGCAATGAGCTGGAGGCTCTCGAGTCCATCTACCCCGATTCCTTCACAGTATTATC
GGAAAATCCACCCAGCTTCACCATTACTGTGACATCTGAGGCCGGAGAAAATGATGAAAGTAAGCTACTTTCTATTTTTC
TAAGAAGTGCTGAAGAAAATCTTGGTATGGTGATGATCTTTACTCTAGTGACAGCTGTGCAAGAAAAATTAAATGAAATA
GTAGATCAGATAAAAACTAGAAGAGAGGAAGAAAAGAAACAAAAAGAAAGAGAAGCAGAAGAAGCAGAAAAGCAACTATT
CCATGGCACTCCTGTTACAATAGAGAATTTCTTAAGTTGGAAGGCCAAGTTTGATGCAGAACTTTTGGAAATTAAAAAGA
AACGGATGAAAGAAGAAGAGCAAGCAGGAAAAAATAAATTGAGTGGGAAACAGCTATTTGAAACAGATCATAATCTTGAC
ACATCTGATATCCAGTTCTTGGAGGATGCTGGAAACAATGTGGAGGTAGATGAGTCTTTGTTCCAGGAAATGGATGACTT
AGAGCTGGAGGATGATGAAGATGACCCAGACTACAATCCTGCTGACCCAGGGAGTGACTCAGCAGACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005692 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000009689 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004474 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007516 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000006587 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000019085 | ortholog_one2many | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000008170 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017837 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013592 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000005016 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022124 | within_species_paralog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002543 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_121 | 88.19 | 68.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_365 | 57.76 | 55.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000020231 retrocopies