Parental gene:

RPL34, ENSTSYG00000001781

Aliases:None
Description:ribosomal protein L34 [Source:HGNC Symbol;Acc:10340]
Organism:Tarsier (Tarsius syrichta)
Coordinates:scaffold_18886:22323..25573(+)


>ENSTSYG00000001781
ATGGTCCAACGTTTGACATACCGTCGCAGGCTTTCCTATAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACACCTGG
TAATAGGATTGTTTACCTATATACCAAGAAGGTTGGGAAAGCACCAAAGTCTGCATGCGGTGTGTGCCCAGGCAGACTTC
GAGGGGTTCGTGCTGTGAGACCTAAAGTTCTTATGAGGTTGTCCAAAACAAAAAAACATGTCAGCCGGGCCTATGGTGGT
TCCATGTGTGCAAAATGTGTTCGTGACAGGATCAAGCGTGCTTTTCTTATCGAGGAGCAGAAAATCGTCGTGAAAGTGTT
GAAGGCACAAGCACAGAGTCAGAAAGCAAAATAA

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2one 26 retrogenes
retro_dnov_1172, retro_dnov_1775, retro_dnov_2020, retro_dnov_2025, retro_dnov_2079, retro_dnov_2127, retro_dnov_2137, retro_dnov_2275, retro_dnov_2385, retro_dnov_2501, retro_dnov_252, retro_dnov_262, retro_dnov_2627, retro_dnov_2651, retro_dnov_325, retro_dnov_339, retro_dnov_430, retro_dnov_553, retro_dnov_565, retro_dnov_59, retro_dnov_606, retro_dnov_635, retro_dnov_658, retro_dnov_862, retro_dnov_88, retro_dnov_978,
Homo sapiens ENSG00000109475 ortholog_one2one 33 retrogenes
retro_hsap_1245, retro_hsap_126, retro_hsap_1265, retro_hsap_1417, retro_hsap_1636, retro_hsap_1735, retro_hsap_1756, retro_hsap_1921, retro_hsap_1987, retro_hsap_2041, retro_hsap_2145, retro_hsap_232, retro_hsap_2570, retro_hsap_258, retro_hsap_2624, retro_hsap_2695, retro_hsap_288, retro_hsap_2997, retro_hsap_3090, retro_hsap_3463, retro_hsap_3550, retro_hsap_3689, retro_hsap_4055, retro_hsap_4091, retro_hsap_4314, retro_hsap_520, retro_hsap_720, retro_hsap_769, retro_hsap_830, retro_hsap_853, retro_hsap_927, retro_hsap_941, retro_hsap_977,
Gadus morhua ENSGMOG00000009982 ortholog_one2one 1 retrogene
retro_gmor_31,
Loxodonta africana ENSLAFG00000032615 ortholog_one2one 6 retrogenes
retro_lafr_1039, retro_lafr_1232, retro_lafr_182, retro_lafr_298, retro_lafr_306, retro_lafr_733,
Macropus eugenii ENSMEUG00000009361 ortholog_one2one 3 retrogenes
retro_meug_1012, retro_meug_1754, retro_meug_1775,
Myotis lucifugus ENSMLUG00000000464 possible_ortholog 4 retrogenes
retro_mluc_125, retro_mluc_1372, retro_mluc_1427, retro_mluc_1847,
Monodelphis domestica ENSMODG00000020601 ortholog_one2one 3 retrogenes
retro_mdom_1690, retro_mdom_774, retro_mdom_836,
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2one 1 retrogene
retro_psin_60,
Rattus norvegicus ENSRNOG00000016387 possible_ortholog 36 retrogenes
retro_rnor_1031, retro_rnor_1083, retro_rnor_1101, retro_rnor_1172, retro_rnor_1376, retro_rnor_1550, retro_rnor_1575, retro_rnor_1630, retro_rnor_1694, retro_rnor_1695, retro_rnor_1696, retro_rnor_1775, retro_rnor_1803, retro_rnor_1844, retro_rnor_1857, retro_rnor_2029, retro_rnor_2090, retro_rnor_2095, retro_rnor_2139, retro_rnor_2230, retro_rnor_2565, retro_rnor_2578, retro_rnor_2597, retro_rnor_2621, retro_rnor_2651, retro_rnor_2794, retro_rnor_282, retro_rnor_367, retro_rnor_500, retro_rnor_575, retro_rnor_605, retro_rnor_617, retro_rnor_672, retro_rnor_848, retro_rnor_866, retro_rnor_869,
Sarcophilus harrisii ENSSHAG00000001357 ortholog_one2many 1 retrogene
retro_shar_799,
Sarcophilus harrisii ENSSHAG00000002052 ortholog_one2many 3 retrogenes
retro_shar_131, retro_shar_324, retro_shar_419,
Tupaia belangeri ENSTBEG00000003574 ortholog_one2one 24 retrogenes
retro_tbel_1109, retro_tbel_1298, retro_tbel_1337, retro_tbel_1532, retro_tbel_1781, retro_tbel_1857, retro_tbel_1941, retro_tbel_213, retro_tbel_2162, retro_tbel_2165, retro_tbel_2372, retro_tbel_2391, retro_tbel_2601, retro_tbel_279, retro_tbel_335, retro_tbel_3606, retro_tbel_3984, retro_tbel_4059, retro_tbel_4398, retro_tbel_657, retro_tbel_74, retro_tbel_901, retro_tbel_974, retro_tbel_983,
Tursiops truncatus ENSTTRG00000003443 ortholog_one2one 6 retrogenes
retro_ttru_1667, retro_ttru_1831, retro_ttru_355, retro_ttru_710, retro_ttru_717, retro_ttru_821,
Xenopus tropicalis ENSXETG00000021095 ortholog_one2many 1 retrogene
retro_xtro_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_49 94.87 100.00
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2. retro_tsyr_59 67.39 78.63
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3. retro_tsyr_140 83.05 100.00
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4. retro_tsyr_164 67.31 86.32
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5. retro_tsyr_211 88.14 100.00
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6. retro_tsyr_220 89.02 70.09
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7. retro_tsyr_221 67.31 87.18
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8. retro_tsyr_254 70.42 58.97
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9. retro_tsyr_300 81.52 77.78
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10. retro_tsyr_375 80.67 100.00
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11. retro_tsyr_597 80.70 96.58
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12. retro_tsyr_678 80.61 82.05
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13. retro_tsyr_812 76.12 57.26
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14. retro_tsyr_853 54.41 58.12
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15. retro_tsyr_872 86.09 98.29
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16. retro_tsyr_897 68.75 54.70
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17. retro_tsyr_1071 63.24 57.26
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18. retro_tsyr_1087 70.69 97.44
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19. retro_tsyr_1141 82.76 97.44
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20. retro_tsyr_1249 79.45 62.39
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21. retro_tsyr_1253 62.07 74.36
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22. retro_tsyr_1292 93.16 100.00
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23. retro_tsyr_1328 68.64 100.00
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24. retro_tsyr_1375 91.18 58.12
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25. retro_tsyr_1414 59.26 69.23
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26. retro_tsyr_1425 62.96 69.23
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27. retro_tsyr_1514 68.18 56.41
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28. retro_tsyr_1573 67.03 76.07
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29. retro_tsyr_1702 87.04 91.45
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30. retro_tsyr_1849 79.66 100.00
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31. retro_tsyr_2033 71.19 100.00
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32. retro_tsyr_2035 67.05 75.21
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33. retro_tsyr_2094 68.38 99.15
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34. retro_tsyr_2172 58.97 96.58
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Download FASTA sequences of all ENSTSYG00000001781 retrocopies