RetrogeneDB ID: | retro_tsyr_2094 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_89102:1413..1757(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSTSYG00000001781 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 68.38 % |
Parental protein coverage: | 99.15 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTK |
...L....R.SYNTASNKTRLS..PGNR..Y.Y.KK.GK.PKSACG.CPGRLR.VR.V.PKVLMRLSKTK | |
Retrocopy | LEALRMIQRRSYNTASNKTRLSQIPGNRFIYIYPKKAGKVPKSACGMCPGRLRWVRGV*PKVLMRLSKTK |
Parental | KHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQA-QSQKAK |
KHVSR.Y..S..AKCV.DRIK.AFLI.EQK...K..K....QSQKAK | |
Retrocopy | KHVSRDYSCSLYAKCVHDRIKHAFLIKEQKF-LKTVKGTS<QSQKAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |