RetrogeneDB ID: | retro_tsyr_678 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_167308:7..293(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSTSYG00000001781 | ||
Aliases: | None | ||
Description: | ribosomal protein L34 [Source:HGNC Symbol;Acc:10340] |
Percent Identity: | 80.61 % |
Parental protein coverage: | 82.05 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | RLSYNTASNKTRLSRTPGNR-IVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTK-KHVSRA |
RL......NK.RLSRTPGNR.IVYLYTKK.GKAPK.ACGVCPGRL.GV.AVR.KVLMRLSKTK.KHVSR. | |
Retrocopy | RLLTKQPLNKIRLSRTPGNR<IVYLYTKKTGKAPKPACGVCPGRLLGVCAVRSKVLMRLSKTK<KHVSRV |
Parental | YGGSMCAKCVRDRIKRAFLIEEQKIVVK |
YGG.MCAKCV.DRIK.AFLIEEQKIV.K | |
Retrocopy | YGGFMCAKCVHDRIKSAFLIEEQKIVMK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |