Parental gene:

RPL34, ENSTTRG00000003443

Aliases:None
Description:ribosomal protein L34 [Source:HGNC Symbol;Acc:10340]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_116003:160961..163556(+)


>ENSTTRG00000003443
ATGGTTCAGCGTTTGACATACCGTCGTAGGCTGTCCTACAATACAGCCTCTAACAAAACCAGGCTGTCCCGAACCCCTGG
TAATAGAATTGTTTACCTTTATACCAAGAAAGTTGGGAAAGCACCAAAATCCGCATGTGGCGTGTGCCCAGGCCGACTTC
GAGGAGTTCGTGCTGTGAGACCTAAAGTTCTTATGAGGTTGTCTAAAACGAAAAAGCATGTTAGCCGGGCCTACGGTGGT
TCCATGTGTGCTAAATGTGTCCGTGACAGGATCAAGCGCGCTTTCCTCATTGAGGAGCAGAAAATCGTTGTGAAAGTGTT
GAAAGCACAAGCACAGAGTCAGAAAGCTAAATAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015993 ortholog_one2one 4 retrogenes
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2one 26 retrogenes
Equus caballus ENSECAG00000019719 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000015502 ortholog_one2one 16 retrogenes
Homo sapiens ENSG00000109475 ortholog_one2one 33 retrogenes
Gadus morhua ENSGMOG00000009982 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000032615 ortholog_one2one 6 retrogenes
Macropus eugenii ENSMEUG00000009361 ortholog_one2one 3 retrogenes
Myotis lucifugus ENSMLUG00000000464 ortholog_one2many 4 retrogenes
Monodelphis domestica ENSMODG00000020601 ortholog_one2one 3 retrogenes
Mus musculus ENSMUSG00000062006 ortholog_one2one 26 retrogenes
Nomascus leucogenys ENSNLEG00000012934 ortholog_one2one 20 retrogenes
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000016387 ortholog_one2many 36 retrogenes
Sarcophilus harrisii ENSSHAG00000001357 ortholog_one2many 1 retrogene
Sarcophilus harrisii ENSSHAG00000002052 ortholog_one2many 3 retrogenes
Sus scrofa ENSSSCG00000009146 ortholog_one2one 8 retrogenes
Tupaia belangeri ENSTBEG00000003574 ortholog_one2one 24 retrogenes
Tarsius syrichta ENSTSYG00000001781 ortholog_one2one 34 retrogenes
Xenopus tropicalis ENSXETG00000021095 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_355 74.55 92.31
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2. retro_ttru_710 78.21 64.96
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3. retro_ttru_717 80.34 99.15
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4. retro_ttru_821 67.47 70.94
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5. retro_ttru_1667 79.49 100.00
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6. retro_ttru_1831 50.75 56.41
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Download FASTA sequences of all ENSTTRG00000003443 retrocopies