Parental gene:

RNPS1, ENSTTRG00000008220

Aliases:None
Description:RNA binding protein S1, serine-rich domain [Source:HGNC Symbol;Acc:10080]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_1270:92795..98276(-)


>ENSTTRG00000008220
ATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAAAATAATAAAAAGTCCAGCACTAGGGCTCCTTC
TCCTACCAAACGCAAAGACCGCTCTGATGAGAAGTCCAAGGATCGCTCTAAAGATAAGGGGGCCACCAAGGAGTCAAGCG
AGAAGGATCGTGGCAGGGATAAAACTCGAAAGAGACGCAGCGCTTCCAGTGGTAGCAGCAGCACCAGGTCTCGGTCCAGC
TCTACCTCCAGCTCAGGCTCCAGCACCAGCACAGGCTCCAGCAGCGGATCCAGCTCATCTTCAGCATCAAGCCGCTCAGG
AAGTTCCAGCACATCCCGCAGCTCCAGCTCCAGCAGCTCCTCTGGCTCACCGAGTCCGTCTCGGCGCAGACATGACAACA
GGCGGCGTTCCCGCTCGAAATCCAAACCACCCAAAAGAGATGAAAAGGAAAGGAAAAGGCGGAGCCCTTCCCCTAAACCC
ACCAAAGTGCACATTGGAAGGCTCACCAGGAATGTGACCAAGGATCATATCATGGAGATATTCTCCACCTATGGGAAAAT
TAAAATGATTGACATGCCTGTAGAAAGGATGCACCCCCATCTGTCTAAAGGCTATGCATATGTGGAGTTTGAGAATCCAG
ATGAGGCCGAGAAGGCGCTGAAGCACATGGACGGAGGACAAATCGATGGCCAGGAGATCACTGCCACTGCTGTGCTGGCC
CCCTGGCCTCGGCCACCCCCCAGGCGATTCAGCCCTCCCAGGAGAATGCTGCCACCACCTCCCATGTGGCGCAGGTCACC
CCCACGGATGAGGAGAAGGTCACGTTCCCCTCGGCGCAGGTCCCCTGTGCGCCGGCGATCCCGCTCCCCTGGCCGCCGCC
GCCACAGGAGCCGCTCCAGCTCCAACTCCTCCCGATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017861 ortholog_one2one 1 retrogene
Bos taurus ENSBTAG00000009969 ortholog_one2one 7 retrogenes
Canis familiaris ENSCAFG00000019397 ortholog_one2one 1 retrogene
Equus caballus ENSECAG00000023288 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000007690 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000205937 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000014275 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000008882 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000016808 ortholog_one2one 3 retrogenes
Macaca mulatta ENSMMUG00000019238 ortholog_one2one 1 retrogene
Monodelphis domestica ENSMODG00000015891 ortholog_one2one 1 retrogene
Mus musculus ENSMUSG00000034681 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000031582 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000008703 possible_ortholog 4 retrogenes
Sarcophilus harrisii ENSSHAG00000016951 ortholog_one2one 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000013200 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000009098 ortholog_one2one 8 retrogenes
Tarsius syrichta ENSTSYG00000001629 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_203 77.50 64.26
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2. retro_ttru_986 74.03 50.16
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3. retro_ttru_1010 75.69 69.84
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4. retro_ttru_1033 71.14 65.25
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5. retro_ttru_1558 72.46 100.00
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6. retro_ttru_1808 82.99 94.75
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7. retro_ttru_1809 84.18 63.61
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Download FASTA sequences of all ENSTTRG00000008220 retrocopies