Parental gene:

RPL24, ENSVPAG00000012246

Aliases:None
Description:ribosomal protein L24 [Source:HGNC Symbol;Acc:10325]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3075:1007921..1012080(-)


>ENSVPAG00000012246
TTCTTTCTTTCTCTTCGCCATTTCCCTTCTCTCGGCCCCTACGCAGCCATGAAGGTCGAGCTGTGCAGTTTCAGCGGGTA
CAAGATCTACCCAGGACACGGGAGGCGCTATGCCAGGACAGACGGGAAGGTTTTCCAATTCCTTAATGCAAAATGTGAGT
CGGCGTTCCTTTCCAAGAGGAATCCTCGGCAGATCAACTGGACTGTCCTCTACAGAAGAAAGCACAAAAAGGGACAATCG
GAAGAAATTCAAAAGAAAAGAACTCGCCGTGCAGTCAAATTCCAGAGGGCCATAACTGGTGCATCTCTTGCTGATATAAT
GGCAAAGAGGAATCAGAAACCTGAAGTTAGGAAGGCTCAACGAGAACAGGCTATCAGGGCTGCCAAGGAAGCAAAAAAGG
CTAAGCAAGCATCTAAAAAGACAGCAATGGCTGCTGCAAAGGCTCCCACAAAGGCGGCACCTAAGCAAAAGATTGTGAAG
CCTGTGAAGGTTTCTGCTCCCCGAGTTGGTGGAAAACGCTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000496 possible_ortholog 3 retrogenes
retro_cjac_2544, retro_cjac_2941, retro_cjac_327,
Cavia porcellus ENSCPOG00000019941 possible_ortholog 5 retrogenes
retro_cpor_1020, retro_cpor_461, retro_cpor_474, retro_cpor_904, retro_cpor_947,
Dasypus novemcinctus ENSDNOG00000003194 ortholog_one2one 9 retrogenes
retro_dnov_1209, retro_dnov_1259, retro_dnov_1449, retro_dnov_1643, retro_dnov_2191, retro_dnov_2407, retro_dnov_2537, retro_dnov_523, retro_dnov_657,
Felis catus ENSFCAG00000003327 possible_ortholog 1 retrogene
retro_fcat_31,
Macropus eugenii ENSMEUG00000009177 ortholog_one2one 7 retrogenes
retro_meug_1769, retro_meug_371, retro_meug_385, retro_meug_449, retro_meug_730, retro_meug_759, retro_meug_963,
Myotis lucifugus ENSMLUG00000017005 possible_ortholog 4 retrogenes
retro_mluc_1990, retro_mluc_2185, retro_mluc_35, retro_mluc_393,
Macaca mulatta ENSMMUG00000015059 possible_ortholog 9 retrogenes
retro_mmul_1234, retro_mmul_1711, retro_mmul_1803, retro_mmul_2263, retro_mmul_2521, retro_mmul_37, retro_mmul_560, retro_mmul_609, retro_mmul_823,
Monodelphis domestica ENSMODG00000001916 ortholog_one2one 3 retrogenes
retro_mdom_675, retro_mdom_854, retro_mdom_974,
Procavia capensis ENSPCAG00000005918 ortholog_one2one 1 retrogene
retro_pcap_192,
Pan troglodytes ENSPTRG00000015176 possible_ortholog 2 retrogenes
retro_ptro_1214, retro_ptro_85,
Rattus norvegicus ENSRNOG00000001611 ortholog_one2many 25 retrogenes
retro_rnor_1244, retro_rnor_1245, retro_rnor_1247, retro_rnor_1248, retro_rnor_1250, retro_rnor_1251, retro_rnor_1252, retro_rnor_1253, retro_rnor_1452, retro_rnor_1643, retro_rnor_1699, retro_rnor_1850, retro_rnor_1851, retro_rnor_1985, retro_rnor_2026, retro_rnor_2134, retro_rnor_2148, retro_rnor_2205, retro_rnor_2214, retro_rnor_2294, retro_rnor_2709, retro_rnor_435, retro_rnor_751, retro_rnor_964, retro_rnor_993,
Sarcophilus harrisii ENSSHAG00000008226 ortholog_one2one 2 retrogenes
retro_shar_171, retro_shar_264,
Ictidomys tridecemlineatus ENSSTOG00000014654 possible_ortholog 2 retrogenes
retro_itri_442, retro_itri_69,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_49 83.13 95.95
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2. retro_vpac_520 81.33 95.38
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3. retro_vpac_597 79.31 50.29
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Download FASTA sequences of all ENSVPAG00000012246 retrocopies